Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.04■□□□□ 0.48
GFRA3O60609 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
GFRA3O60609 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.04■□□□□ 0.48
GFRA3O60609 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.04■□□□□ 0.48
GFRA3O60609 AL359881.2-201ENST00000602973 570 ntBASIC18.04■□□□□ 0.48
GFRA3O60609 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.04■□□□□ 0.48
GFRA3O60609 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GFRA3O60609 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GFRA3O60609 SMG8-203ENST00000578922 2178 ntBASIC18.04■□□□□ 0.48
GFRA3O60609 GUSBP5-202ENST00000510805 1989 ntBASIC18.04■□□□□ 0.48
GFRA3O60609 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
GFRA3O60609 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GFRA3O60609 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GFRA3O60609 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
GFRA3O60609 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
GFRA3O60609 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
GFRA3O60609 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GFRA3O60609 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GFRA3O60609 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GFRA3O60609 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.03■□□□□ 0.48
GFRA3O60609 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GFRA3O60609 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.03■□□□□ 0.48
GFRA3O60609 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GFRA3O60609 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GFRA3O60609 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GFRA3O60609 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
GFRA3O60609 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
GFRA3O60609 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GFRA3O60609 AL139400.1-201ENST00000366220 510 ntBASIC18.03■□□□□ 0.48
GFRA3O60609 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GFRA3O60609 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.03■□□□□ 0.48
GFRA3O60609 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.03■□□□□ 0.48
GFRA3O60609 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.03■□□□□ 0.48
GFRA3O60609 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GFRA3O60609 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.03■□□□□ 0.48
GFRA3O60609 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GFRA3O60609 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.03■□□□□ 0.48
GFRA3O60609 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.03■□□□□ 0.48
GFRA3O60609 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.03■□□□□ 0.48
GFRA3O60609 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.03■□□□□ 0.48
GFRA3O60609 AC087641.1-201ENST00000557561 1021 ntBASIC18.03■□□□□ 0.48
GFRA3O60609 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
GFRA3O60609 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.03■□□□□ 0.48
GFRA3O60609 AJ011932.1-201ENST00000621707 465 ntBASIC18.03■□□□□ 0.48
GFRA3O60609 AC092865.6-201ENST00000642101 219 ntBASIC18.03■□□□□ 0.48
GFRA3O60609 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
GFRA3O60609 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.03■□□□□ 0.48
GFRA3O60609 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.03■□□□□ 0.48
GFRA3O60609 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GFRA3O60609 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GFRA3O60609 AIRN-201ENST00000601203 4374 ntBASIC18.02■□□□□ 0.48
GFRA3O60609 Z98882.1-201ENST00000622160 2253 ntBASIC18.02■□□□□ 0.48
GFRA3O60609 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.02■□□□□ 0.48
GFRA3O60609 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GFRA3O60609 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GFRA3O60609 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
GFRA3O60609 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
GFRA3O60609 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GFRA3O60609 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
GFRA3O60609 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
GFRA3O60609 LAGE3P1-201ENST00000425356 484 ntBASIC18.02■□□□□ 0.48
GFRA3O60609 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.02■□□□□ 0.48
GFRA3O60609 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.02■□□□□ 0.48
GFRA3O60609 LINC00565-201ENST00000562710 2331 ntBASIC18.02■□□□□ 0.48
GFRA3O60609 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.02■□□□□ 0.48
GFRA3O60609 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.02■□□□□ 0.48
GFRA3O60609 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GFRA3O60609 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
GFRA3O60609 HEIH-201ENST00000623091 1652 ntBASIC18.02■□□□□ 0.47
GFRA3O60609 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
GFRA3O60609 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.02■□□□□ 0.47
GFRA3O60609 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
GFRA3O60609 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
GFRA3O60609 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
GFRA3O60609 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GFRA3O60609 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
GFRA3O60609 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
GFRA3O60609 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GFRA3O60609 PMS2P4-201ENST00000412466 1052 ntBASIC18.01■□□□□ 0.47
GFRA3O60609 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.01■□□□□ 0.47
GFRA3O60609 AC108751.1-201ENST00000490852 363 ntBASIC18.01■□□□□ 0.47
GFRA3O60609 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.01■□□□□ 0.47
GFRA3O60609 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
GFRA3O60609 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.01■□□□□ 0.47
GFRA3O60609 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.01■□□□□ 0.47
GFRA3O60609 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.01■□□□□ 0.47
GFRA3O60609 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.01■□□□□ 0.47
GFRA3O60609 AC005593.1-201ENST00000624894 515 ntBASIC18.01■□□□□ 0.47
GFRA3O60609 AL109659.2-201ENST00000606809 1674 ntBASIC18.01■□□□□ 0.47
GFRA3O60609 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
GFRA3O60609 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.01■□□□□ 0.47
GFRA3O60609 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GFRA3O60609 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.01■□□□□ 0.47
GFRA3O60609 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.01■□□□□ 0.47
GFRA3O60609 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GFRA3O60609 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GFRA3O60609 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GFRA3O60609 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
GFRA3O60609 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18■□□□□ 0.47
GFRA3O60609 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms