Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.32■□□□□ 0.36
PRKNO60260 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRKNO60260 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRKNO60260 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRKNO60260 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRKNO60260 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRKNO60260 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRKNO60260 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRKNO60260 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PRKNO60260 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRKNO60260 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.31■□□□□ 0.36
PRKNO60260 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRKNO60260 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRKNO60260 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRKNO60260 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
PRKNO60260 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.31■□□□□ 0.36
PRKNO60260 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRKNO60260 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRKNO60260 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRKNO60260 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.31■□□□□ 0.36
PRKNO60260 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
PRKNO60260 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PRKNO60260 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRKNO60260 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.31■□□□□ 0.36
PRKNO60260 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.31■□□□□ 0.36
PRKNO60260 AC024243.1-201ENST00000609234 778 ntBASIC17.31■□□□□ 0.36
PRKNO60260 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
PRKNO60260 AC083906.6-201ENST00000641366 219 ntBASIC17.31■□□□□ 0.36
PRKNO60260 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRKNO60260 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRKNO60260 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PRKNO60260 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRKNO60260 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRKNO60260 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PRKNO60260 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRKNO60260 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.31■□□□□ 0.36
PRKNO60260 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.31■□□□□ 0.36
PRKNO60260 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.31■□□□□ 0.36
PRKNO60260 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRKNO60260 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.3■□□□□ 0.36
PRKNO60260 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRKNO60260 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PRKNO60260 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRKNO60260 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PRKNO60260 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRKNO60260 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRKNO60260 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
PRKNO60260 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.3■□□□□ 0.36
PRKNO60260 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRKNO60260 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.3■□□□□ 0.36
PRKNO60260 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.3■□□□□ 0.36
PRKNO60260 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRKNO60260 MIR564-202ENST00000385049 94 ntBASIC17.3■□□□□ 0.36
PRKNO60260 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRKNO60260 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.3■□□□□ 0.36
PRKNO60260 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.3■□□□□ 0.36
PRKNO60260 AL359075.1-203ENST00000462729 1002 ntBASIC17.3■□□□□ 0.36
PRKNO60260 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.3■□□□□ 0.36
PRKNO60260 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.3■□□□□ 0.36
PRKNO60260 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.3■□□□□ 0.36
PRKNO60260 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PRKNO60260 AL031432.5-201ENST00000641059 760 ntBASIC17.3■□□□□ 0.36
PRKNO60260 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRKNO60260 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
PRKNO60260 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRKNO60260 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRKNO60260 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.3■□□□□ 0.36
PRKNO60260 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRKNO60260 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.29■□□□□ 0.36
PRKNO60260 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRKNO60260 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
PRKNO60260 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRKNO60260 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRKNO60260 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.29■□□□□ 0.36
PRKNO60260 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRKNO60260 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRKNO60260 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRKNO60260 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRKNO60260 FAM8A6P-201ENST00000407496 1135 ntBASIC17.29■□□□□ 0.36
PRKNO60260 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.29■□□□□ 0.36
PRKNO60260 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
PRKNO60260 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PRKNO60260 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRKNO60260 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PRKNO60260 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PRKNO60260 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRKNO60260 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRKNO60260 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.29■□□□□ 0.36
PRKNO60260 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRKNO60260 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.29■□□□□ 0.36
PRKNO60260 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRKNO60260 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRKNO60260 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.29■□□□□ 0.36
PRKNO60260 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRKNO60260 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRKNO60260 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PRKNO60260 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.28■□□□□ 0.36
PRKNO60260 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRKNO60260 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRKNO60260 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms