Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
RNF13O43567 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF13O43567 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF13O43567 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF13O43567 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF13O43567 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF13O43567 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
RNF13O43567 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RNF13O43567 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF13O43567 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RNF13O43567 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RNF13O43567 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF13O43567 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF13O43567 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF13O43567 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF13O43567 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF13O43567 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF13O43567 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RNF13O43567 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF13O43567 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF13O43567 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.97■□□□□ 0.31
RNF13O43567 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF13O43567 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF13O43567 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF13O43567 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.97■□□□□ 0.31
RNF13O43567 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF13O43567 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF13O43567 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF13O43567 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF13O43567 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF13O43567 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.97■□□□□ 0.31
RNF13O43567 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF13O43567 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF13O43567 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF13O43567 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF13O43567 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF13O43567 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF13O43567 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF13O43567 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF13O43567 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF13O43567 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF13O43567 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF13O43567 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RNF13O43567 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
RNF13O43567 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
RNF13O43567 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF13O43567 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF13O43567 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF13O43567 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF13O43567 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF13O43567 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RNF13O43567 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF13O43567 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF13O43567 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RNF13O43567 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF13O43567 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF13O43567 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF13O43567 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.96■□□□□ 0.31
RNF13O43567 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RNF13O43567 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF13O43567 GCSHP5-201ENST00000443090 522 ntBASIC16.96■□□□□ 0.31
RNF13O43567 FAM207BP-201ENST00000447172 505 ntBASIC16.96■□□□□ 0.31
RNF13O43567 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF13O43567 CD177P1-201ENST00000606252 935 ntBASIC16.96■□□□□ 0.31
RNF13O43567 MIR6786-201ENST00000616843 113 ntBASIC16.96■□□□□ 0.31
RNF13O43567 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.96■□□□□ 0.31
RNF13O43567 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF13O43567 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF13O43567 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF13O43567 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
RNF13O43567 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF13O43567 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF13O43567 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF13O43567 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF13O43567 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RNF13O43567 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RNF13O43567 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RNF13O43567 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RNF13O43567 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF13O43567 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF13O43567 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RNF13O43567 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF13O43567 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF13O43567 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF13O43567 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.95■□□□□ 0.3
RNF13O43567 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF13O43567 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF13O43567 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF13O43567 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF13O43567 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF13O43567 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RNF13O43567 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF13O43567 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.95■□□□□ 0.3
RNF13O43567 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.95■□□□□ 0.3
RNF13O43567 AC130371.2-201ENST00000619443 611 ntBASIC16.95■□□□□ 0.3
RNF13O43567 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF13O43567 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF13O43567 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF13O43567 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RNF13O43567 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms