Protein–RNA interactions for Protein: O15534

PER1, Period circadian protein homolog 1, humanhuman

Predicted RBP Predictions only

Length 1,290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER1O15534 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC25.25■■□□□ 1.63
PER1O15534 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC25.24■■□□□ 1.63
PER1O15534 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PER1O15534 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PER1O15534 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PER1O15534 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
PER1O15534 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC25.24■■□□□ 1.63
PER1O15534 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PER1O15534 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
PER1O15534 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
PER1O15534 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PER1O15534 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PER1O15534 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
PER1O15534 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PER1O15534 AL031133.1-201ENST00000406807 723 ntBASIC25.24■■□□□ 1.63
PER1O15534 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PER1O15534 LY6E-213ENST00000522528 606 ntTSL 3 BASIC25.24■■□□□ 1.63
PER1O15534 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC25.24■■□□□ 1.63
PER1O15534 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PER1O15534 AC010331.1-201ENST00000611423 582 ntBASIC25.24■■□□□ 1.63
PER1O15534 AC083849.1-201ENST00000615227 514 ntBASIC25.24■■□□□ 1.63
PER1O15534 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PER1O15534 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC25.24■■□□□ 1.63
PER1O15534 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
PER1O15534 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC25.24■■□□□ 1.63
PER1O15534 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC25.24■■□□□ 1.63
PER1O15534 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PER1O15534 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC25.23■■□□□ 1.63
PER1O15534 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PER1O15534 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC25.23■■□□□ 1.63
PER1O15534 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PER1O15534 AC104581.1-202ENST00000635932 2618 ntBASIC25.23■■□□□ 1.63
PER1O15534 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PER1O15534 HBZP1-201ENST00000354915 429 ntBASIC25.23■■□□□ 1.63
PER1O15534 PVRIG2P-201ENST00000435460 978 ntBASIC25.23■■□□□ 1.63
PER1O15534 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC25.23■■□□□ 1.63
PER1O15534 NTF6B-201ENST00000591913 560 ntBASIC25.23■■□□□ 1.63
PER1O15534 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PER1O15534 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
PER1O15534 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC25.22■■□□□ 1.63
PER1O15534 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PER1O15534 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PER1O15534 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PER1O15534 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PER1O15534 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
PER1O15534 MIR149-201ENST00000384879 89 ntBASIC25.22■■□□□ 1.63
PER1O15534 AC112907.2-201ENST00000448639 330 ntBASIC25.22■■□□□ 1.63
PER1O15534 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC25.22■■□□□ 1.63
PER1O15534 REEP1-209ENST00000541910 969 ntTSL 2 BASIC25.22■■□□□ 1.63
PER1O15534 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC25.22■■□□□ 1.63
PER1O15534 ADK-206ENST00000541550 2222 ntTSL 2 BASIC25.22■■□□□ 1.63
PER1O15534 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC25.22■■□□□ 1.63
PER1O15534 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PER1O15534 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PER1O15534 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PER1O15534 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PER1O15534 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PER1O15534 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC25.22■■□□□ 1.63
PER1O15534 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PER1O15534 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
PER1O15534 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC25.21■■□□□ 1.63
PER1O15534 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PER1O15534 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
PER1O15534 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PER1O15534 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC25.21■■□□□ 1.63
PER1O15534 AL391807.1-203ENST00000604392 2365 ntBASIC25.21■■□□□ 1.63
PER1O15534 BET1L-202ENST00000332865 533 ntTSL 5 BASIC25.21■■□□□ 1.63
PER1O15534 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PER1O15534 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC25.21■■□□□ 1.63
PER1O15534 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC25.21■■□□□ 1.63
PER1O15534 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC25.21■■□□□ 1.63
PER1O15534 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC25.21■■□□□ 1.63
PER1O15534 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
PER1O15534 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PER1O15534 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PER1O15534 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PER1O15534 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PER1O15534 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PER1O15534 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
PER1O15534 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PER1O15534 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
PER1O15534 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
PER1O15534 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
PER1O15534 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
PER1O15534 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
PER1O15534 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.63
PER1O15534 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PER1O15534 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PER1O15534 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
PER1O15534 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PER1O15534 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PER1O15534 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PER1O15534 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PER1O15534 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PER1O15534 MIR1224-201ENST00000408193 85 ntBASIC25.2■■□□□ 1.62
PER1O15534 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC25.2■■□□□ 1.62
PER1O15534 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC25.2■■□□□ 1.62
PER1O15534 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC25.2■■□□□ 1.62
PER1O15534 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PER1O15534 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms