Protein–RNA interactions for Protein: O15164

TRIM24, Transcription intermediary factor 1-alpha, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM24O15164 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TRIM24O15164 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM24O15164 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM24O15164 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM24O15164 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM24O15164 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.19■□□□□ 0.66
TRIM24O15164 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TRIM24O15164 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM24O15164 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM24O15164 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM24O15164 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM24O15164 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM24O15164 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM24O15164 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM24O15164 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM24O15164 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM24O15164 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM24O15164 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM24O15164 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM24O15164 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.18■□□□□ 0.66
TRIM24O15164 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM24O15164 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM24O15164 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM24O15164 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM24O15164 FEM1AP3-201ENST00000403722 1741 ntBASIC19.18■□□□□ 0.66
TRIM24O15164 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM24O15164 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM24O15164 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM24O15164 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.18■□□□□ 0.66
TRIM24O15164 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.18■□□□□ 0.66
TRIM24O15164 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.18■□□□□ 0.66
TRIM24O15164 AC079602.3-201ENST00000623931 403 ntBASIC19.18■□□□□ 0.66
TRIM24O15164 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.18■□□□□ 0.66
TRIM24O15164 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.18■□□□□ 0.66
TRIM24O15164 AL157888.1-201ENST00000631930 593 ntBASIC19.18■□□□□ 0.66
TRIM24O15164 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM24O15164 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM24O15164 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM24O15164 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM24O15164 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM24O15164 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM24O15164 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.18■□□□□ 0.66
TRIM24O15164 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM24O15164 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM24O15164 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.17■□□□□ 0.66
TRIM24O15164 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TRIM24O15164 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM24O15164 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM24O15164 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM24O15164 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM24O15164 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM24O15164 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM24O15164 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM24O15164 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM24O15164 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM24O15164 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM24O15164 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM24O15164 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TRIM24O15164 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM24O15164 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.17■□□□□ 0.66
TRIM24O15164 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM24O15164 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.17■□□□□ 0.66
TRIM24O15164 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.17■□□□□ 0.66
TRIM24O15164 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM24O15164 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM24O15164 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM24O15164 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM24O15164 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TRIM24O15164 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM24O15164 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM24O15164 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM24O15164 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.17■□□□□ 0.66
TRIM24O15164 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TRIM24O15164 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
TRIM24O15164 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM24O15164 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM24O15164 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM24O15164 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM24O15164 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM24O15164 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM24O15164 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.17■□□□□ 0.66
TRIM24O15164 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM24O15164 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM24O15164 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM24O15164 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TRIM24O15164 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM24O15164 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TRIM24O15164 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.16■□□□□ 0.66
TRIM24O15164 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.16■□□□□ 0.66
TRIM24O15164 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TRIM24O15164 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TRIM24O15164 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM24O15164 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM24O15164 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM24O15164 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM24O15164 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.16■□□□□ 0.66
TRIM24O15164 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM24O15164 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.16■□□□□ 0.66
TRIM24O15164 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM24O15164 AC069148.1-201ENST00000608741 768 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms