Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
UBFD1O14562 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBFD1O14562 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
UBFD1O14562 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
UBFD1O14562 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
UBFD1O14562 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.08■□□□□ 0.49
UBFD1O14562 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
UBFD1O14562 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
UBFD1O14562 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.08■□□□□ 0.49
UBFD1O14562 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.08■□□□□ 0.49
UBFD1O14562 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.08■□□□□ 0.49
UBFD1O14562 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBFD1O14562 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.08■□□□□ 0.48
UBFD1O14562 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
UBFD1O14562 RARRES2P10-201ENST00000564312 460 ntBASIC18.08■□□□□ 0.48
UBFD1O14562 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.08■□□□□ 0.48
UBFD1O14562 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.08■□□□□ 0.48
UBFD1O14562 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.08■□□□□ 0.48
UBFD1O14562 AC073195.1-201ENST00000607241 877 ntBASIC18.08■□□□□ 0.48
UBFD1O14562 MIR6786-201ENST00000616843 113 ntBASIC18.08■□□□□ 0.48
UBFD1O14562 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
UBFD1O14562 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBFD1O14562 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UBFD1O14562 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
UBFD1O14562 AL109659.2-201ENST00000606809 1674 ntBASIC18.08■□□□□ 0.48
UBFD1O14562 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.08■□□□□ 0.48
UBFD1O14562 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.08■□□□□ 0.48
UBFD1O14562 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBFD1O14562 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBFD1O14562 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.08■□□□□ 0.48
UBFD1O14562 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.07■□□□□ 0.48
UBFD1O14562 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBFD1O14562 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
UBFD1O14562 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
UBFD1O14562 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBFD1O14562 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
UBFD1O14562 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.07■□□□□ 0.48
UBFD1O14562 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.07■□□□□ 0.48
UBFD1O14562 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBFD1O14562 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBFD1O14562 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBFD1O14562 CD99P1-205ENST00000527459 561 ntBASIC18.07■□□□□ 0.48
UBFD1O14562 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.07■□□□□ 0.48
UBFD1O14562 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.07■□□□□ 0.48
UBFD1O14562 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.07■□□□□ 0.48
UBFD1O14562 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.07■□□□□ 0.48
UBFD1O14562 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
UBFD1O14562 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBFD1O14562 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.07■□□□□ 0.48
UBFD1O14562 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
UBFD1O14562 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.07■□□□□ 0.48
UBFD1O14562 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
UBFD1O14562 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBFD1O14562 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
UBFD1O14562 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
UBFD1O14562 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.06■□□□□ 0.48
UBFD1O14562 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBFD1O14562 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBFD1O14562 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
UBFD1O14562 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBFD1O14562 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.06■□□□□ 0.48
UBFD1O14562 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBFD1O14562 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBFD1O14562 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBFD1O14562 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBFD1O14562 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBFD1O14562 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBFD1O14562 KRT18P41-201ENST00000518924 1277 ntBASIC18.06■□□□□ 0.48
UBFD1O14562 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBFD1O14562 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
UBFD1O14562 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.06■□□□□ 0.48
UBFD1O14562 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.06■□□□□ 0.48
UBFD1O14562 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBFD1O14562 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBFD1O14562 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBFD1O14562 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBFD1O14562 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.06■□□□□ 0.48
UBFD1O14562 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBFD1O14562 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBFD1O14562 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
UBFD1O14562 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
UBFD1O14562 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBFD1O14562 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBFD1O14562 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBFD1O14562 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBFD1O14562 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBFD1O14562 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBFD1O14562 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBFD1O14562 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBFD1O14562 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBFD1O14562 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBFD1O14562 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBFD1O14562 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
UBFD1O14562 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
UBFD1O14562 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBFD1O14562 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.05■□□□□ 0.48
UBFD1O14562 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
UBFD1O14562 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBFD1O14562 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBFD1O14562 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms