Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC018845.2-201ENST00000568326 409 ntBASIC17.47■□□□□ 0.39
CACNA1AO00555 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.47■□□□□ 0.39
CACNA1AO00555 NKAPP1-205ENST00000585790 367 ntBASIC17.47■□□□□ 0.39
CACNA1AO00555 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CACNA1AO00555 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CACNA1AO00555 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CACNA1AO00555 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.47■□□□□ 0.39
CACNA1AO00555 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.47■□□□□ 0.39
CACNA1AO00555 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.47■□□□□ 0.39
CACNA1AO00555 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CACNA1AO00555 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.47■□□□□ 0.39
CACNA1AO00555 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.47■□□□□ 0.39
CACNA1AO00555 ACTG1P14-201ENST00000446382 1122 ntBASIC17.47■□□□□ 0.39
CACNA1AO00555 TSPY16P-201ENST00000449843 468 ntBASIC17.47■□□□□ 0.39
CACNA1AO00555 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CACNA1AO00555 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.47■□□□□ 0.39
CACNA1AO00555 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.47■□□□□ 0.39
CACNA1AO00555 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA1AO00555 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA1AO00555 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA1AO00555 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA1AO00555 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA1AO00555 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.46■□□□□ 0.39
CACNA1AO00555 GPR89P-201ENST00000407924 1495 ntBASIC17.46■□□□□ 0.39
CACNA1AO00555 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA1AO00555 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.46■□□□□ 0.39
CACNA1AO00555 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CACNA1AO00555 ATP5G2P4-201ENST00000442175 420 ntBASIC17.46■□□□□ 0.39
CACNA1AO00555 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CACNA1AO00555 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CACNA1AO00555 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.46■□□□□ 0.38
CACNA1AO00555 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CACNA1AO00555 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.38
CACNA1AO00555 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.46■□□□□ 0.38
CACNA1AO00555 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
CACNA1AO00555 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.46■□□□□ 0.38
CACNA1AO00555 AC055876.3-201ENST00000431496 288 ntBASIC17.46■□□□□ 0.38
CACNA1AO00555 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.46■□□□□ 0.38
CACNA1AO00555 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.46■□□□□ 0.38
CACNA1AO00555 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.46■□□□□ 0.38
CACNA1AO00555 AL132655.2-201ENST00000596276 594 ntBASIC17.46■□□□□ 0.38
CACNA1AO00555 AC138649.4-201ENST00000612222 287 ntBASIC17.46■□□□□ 0.38
CACNA1AO00555 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.46■□□□□ 0.38
CACNA1AO00555 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA1AO00555 AC097374.2-201ENST00000618617 1306 ntBASIC17.45■□□□□ 0.38
CACNA1AO00555 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.45■□□□□ 0.38
CACNA1AO00555 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA1AO00555 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA1AO00555 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA1AO00555 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.45■□□□□ 0.38
CACNA1AO00555 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.45■□□□□ 0.38
CACNA1AO00555 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA1AO00555 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CACNA1AO00555 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.45■□□□□ 0.38
CACNA1AO00555 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.45■□□□□ 0.38
CACNA1AO00555 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.45■□□□□ 0.38
CACNA1AO00555 PLK5-205ENST00000642079 1969 ntBASIC17.45■□□□□ 0.38
CACNA1AO00555 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA1AO00555 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.45■□□□□ 0.38
CACNA1AO00555 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC17.45■□□□□ 0.38
CACNA1AO00555 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.45■□□□□ 0.38
CACNA1AO00555 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA1AO00555 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA1AO00555 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CACNA1AO00555 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA1AO00555 AC104417.2-201ENST00000562989 1793 ntBASIC17.45■□□□□ 0.38
CACNA1AO00555 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.45■□□□□ 0.38
CACNA1AO00555 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.45■□□□□ 0.38
CACNA1AO00555 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.45■□□□□ 0.38
CACNA1AO00555 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CACNA1AO00555 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.45■□□□□ 0.38
CACNA1AO00555 SMG8-203ENST00000578922 2178 ntBASIC17.44■□□□□ 0.38
CACNA1AO00555 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.44■□□□□ 0.38
CACNA1AO00555 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA1AO00555 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA1AO00555 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.44■□□□□ 0.38
CACNA1AO00555 HCG4B-203ENST00000450128 991 ntBASIC17.44■□□□□ 0.38
CACNA1AO00555 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CACNA1AO00555 AC136632.2-201ENST00000512891 861 ntBASIC17.44■□□□□ 0.38
CACNA1AO00555 AC025048.6-201ENST00000634326 1161 ntBASIC17.44■□□□□ 0.38
CACNA1AO00555 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.44■□□□□ 0.38
CACNA1AO00555 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.44■□□□□ 0.38
CACNA1AO00555 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CACNA1AO00555 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA1AO00555 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA1AO00555 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA1AO00555 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CACNA1AO00555 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.44■□□□□ 0.38
CACNA1AO00555 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CACNA1AO00555 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.44■□□□□ 0.38
CACNA1AO00555 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.44■□□□□ 0.38
CACNA1AO00555 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
CACNA1AO00555 AC008761.3-201ENST00000624803 892 ntBASIC17.44■□□□□ 0.38
CACNA1AO00555 AP000867.4-201ENST00000641616 219 ntBASIC17.44■□□□□ 0.38
CACNA1AO00555 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.44■□□□□ 0.38
CACNA1AO00555 C9orf163-202ENST00000624034 2573 ntBASIC17.43■□□□□ 0.38
CACNA1AO00555 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CACNA1AO00555 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.43■□□□□ 0.38
CACNA1AO00555 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CACNA1AO00555 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms