Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 HTR7P1-202ENST00000624664 4411 ntBASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.96■□□□□ 0.3
NPIPA2E9PIF3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NPIPA2E9PIF3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NPIPA2E9PIF3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NPIPA2E9PIF3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.96■□□□□ 0.3
NPIPA2E9PIF3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.96■□□□□ 0.3
NPIPA2E9PIF3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NPIPA2E9PIF3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.96■□□□□ 0.3
NPIPA2E9PIF3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 AC036111.1-201ENST00000533973 1582 ntBASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 STARP1-201ENST00000397973 869 ntBASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 AL023284.2-201ENST00000405850 579 ntBASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 AC093458.2-201ENST00000623150 629 ntBASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 AC005332.1-201ENST00000577698 1310 ntBASIC16.95■□□□□ 0.3
NPIPA2E9PIF3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.94■□□□□ 0.3
NPIPA2E9PIF3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NPIPA2E9PIF3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.94■□□□□ 0.3
NPIPA2E9PIF3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NPIPA2E9PIF3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NPIPA2E9PIF3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NPIPA2E9PIF3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
NPIPA2E9PIF3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NPIPA2E9PIF3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NPIPA2E9PIF3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
NPIPA2E9PIF3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.94■□□□□ 0.3
NPIPA2E9PIF3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NPIPA2E9PIF3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NPIPA2E9PIF3 VENTXP5-201ENST00000523979 775 ntBASIC16.94■□□□□ 0.3
NPIPA2E9PIF3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.94■□□□□ 0.3
NPIPA2E9PIF3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.94■□□□□ 0.3
NPIPA2E9PIF3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NPIPA2E9PIF3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NPIPA2E9PIF3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NPIPA2E9PIF3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NPIPA2E9PIF3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NPIPA2E9PIF3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NPIPA2E9PIF3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPIPA2E9PIF3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms