Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.3■□□□□ 0.68
SRRM3A6NNA2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRRM3A6NNA2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SRRM3A6NNA2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRRM3A6NNA2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRRM3A6NNA2 KRT8P20-201ENST00000423953 1409 ntBASIC19.3■□□□□ 0.68
SRRM3A6NNA2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRRM3A6NNA2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRRM3A6NNA2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRRM3A6NNA2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.3■□□□□ 0.68
SRRM3A6NNA2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRRM3A6NNA2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SRRM3A6NNA2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRRM3A6NNA2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.3■□□□□ 0.68
SRRM3A6NNA2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRRM3A6NNA2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRRM3A6NNA2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRRM3A6NNA2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRRM3A6NNA2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRRM3A6NNA2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SRRM3A6NNA2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRRM3A6NNA2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRRM3A6NNA2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SRRM3A6NNA2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.29■□□□□ 0.68
SRRM3A6NNA2 CYP2D8P-201ENST00000433633 1490 ntBASIC19.29■□□□□ 0.68
SRRM3A6NNA2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.29■□□□□ 0.68
SRRM3A6NNA2 HTR7P1-201ENST00000538670 1336 ntBASIC19.29■□□□□ 0.68
SRRM3A6NNA2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.29■□□□□ 0.68
SRRM3A6NNA2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRRM3A6NNA2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRRM3A6NNA2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.29■□□□□ 0.68
SRRM3A6NNA2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRRM3A6NNA2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRRM3A6NNA2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SRRM3A6NNA2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SRRM3A6NNA2 CRYGFP-201ENST00000418459 633 ntBASIC19.29■□□□□ 0.68
SRRM3A6NNA2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.29■□□□□ 0.68
SRRM3A6NNA2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SRRM3A6NNA2 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SRRM3A6NNA2 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
SRRM3A6NNA2 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SRRM3A6NNA2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SRRM3A6NNA2 AC126763.1-201ENST00000552015 2118 ntBASIC19.29■□□□□ 0.68
SRRM3A6NNA2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.29■□□□□ 0.68
SRRM3A6NNA2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.29■□□□□ 0.68
SRRM3A6NNA2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SRRM3A6NNA2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SRRM3A6NNA2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.29■□□□□ 0.68
SRRM3A6NNA2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM3A6NNA2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM3A6NNA2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM3A6NNA2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM3A6NNA2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM3A6NNA2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SRRM3A6NNA2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.28■□□□□ 0.68
SRRM3A6NNA2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM3A6NNA2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM3A6NNA2 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM3A6NNA2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM3A6NNA2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM3A6NNA2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM3A6NNA2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM3A6NNA2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.28■□□□□ 0.68
SRRM3A6NNA2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.28■□□□□ 0.68
SRRM3A6NNA2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM3A6NNA2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SRRM3A6NNA2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM3A6NNA2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM3A6NNA2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.28■□□□□ 0.68
SRRM3A6NNA2 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SRRM3A6NNA2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM3A6NNA2 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.27■□□□□ 0.68
SRRM3A6NNA2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SRRM3A6NNA2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRRM3A6NNA2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRRM3A6NNA2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.27■□□□□ 0.68
SRRM3A6NNA2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRRM3A6NNA2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRRM3A6NNA2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.27■□□□□ 0.68
SRRM3A6NNA2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRRM3A6NNA2 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.27■□□□□ 0.68
SRRM3A6NNA2 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.27■□□□□ 0.68
SRRM3A6NNA2 AC006011.2-201ENST00000621313 1158 ntBASIC19.27■□□□□ 0.68
SRRM3A6NNA2 AC105020.6-201ENST00000621523 1217 ntBASIC19.27■□□□□ 0.68
SRRM3A6NNA2 AC010947.1-201ENST00000623454 693 ntBASIC19.27■□□□□ 0.68
SRRM3A6NNA2 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.27■□□□□ 0.68
SRRM3A6NNA2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRRM3A6NNA2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SRRM3A6NNA2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRRM3A6NNA2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SRRM3A6NNA2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SRRM3A6NNA2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SRRM3A6NNA2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SRRM3A6NNA2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SRRM3A6NNA2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SRRM3A6NNA2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SRRM3A6NNA2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SRRM3A6NNA2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.26■□□□□ 0.67
SRRM3A6NNA2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms