Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 AC138932.1-201ENST00000534164 6830 ntBASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 AC120498.9-201ENST00000339021 3867 ntBASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 TSPY22P-201ENST00000427496 604 ntBASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 KRT8P26-201ENST00000534154 1276 ntBASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TBC1D3FA6NER0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TBC1D3FA6NER0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TBC1D3FA6NER0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TBC1D3FA6NER0 AC093525.10-201ENST00000625130 1569 ntBASIC18.52■□□□□ 0.56
TBC1D3FA6NER0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TBC1D3FA6NER0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TBC1D3FA6NER0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.52■□□□□ 0.56
TBC1D3FA6NER0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TBC1D3FA6NER0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TBC1D3FA6NER0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.52■□□□□ 0.56
TBC1D3FA6NER0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TBC1D3FA6NER0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.52■□□□□ 0.56
TBC1D3FA6NER0 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.52■□□□□ 0.56
TBC1D3FA6NER0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.52■□□□□ 0.56
TBC1D3FA6NER0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.52■□□□□ 0.56
TBC1D3FA6NER0 MIR3652-201ENST00000579335 131 ntBASIC18.52■□□□□ 0.56
TBC1D3FA6NER0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TBC1D3FA6NER0 AL121894.2-201ENST00000602977 491 ntBASIC18.52■□□□□ 0.56
TBC1D3FA6NER0 AC012313.10-201ENST00000623509 926 ntBASIC18.52■□□□□ 0.56
TBC1D3FA6NER0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.52■□□□□ 0.56
TBC1D3FA6NER0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TBC1D3FA6NER0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TBC1D3FA6NER0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.52■□□□□ 0.56
TBC1D3FA6NER0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.52■□□□□ 0.56
TBC1D3FA6NER0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.52■□□□□ 0.55
TBC1D3FA6NER0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
TBC1D3FA6NER0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.52■□□□□ 0.55
TBC1D3FA6NER0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TBC1D3FA6NER0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.52■□□□□ 0.55
TBC1D3FA6NER0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms