Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RCCD1A6NED2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RCCD1A6NED2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RCCD1A6NED2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RCCD1A6NED2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.82■□□□□ 0.76
RCCD1A6NED2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RCCD1A6NED2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RCCD1A6NED2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.82■□□□□ 0.76
RCCD1A6NED2 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RCCD1A6NED2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RCCD1A6NED2 AL355802.2-201ENST00000402069 882 ntBASIC19.82■□□□□ 0.76
RCCD1A6NED2 AC239809.2-201ENST00000415381 517 ntBASIC19.82■□□□□ 0.76
RCCD1A6NED2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RCCD1A6NED2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.82■□□□□ 0.76
RCCD1A6NED2 RPS2P4-201ENST00000476944 856 ntBASIC19.82■□□□□ 0.76
RCCD1A6NED2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RCCD1A6NED2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RCCD1A6NED2 AC124016.1-201ENST00000609552 612 ntBASIC19.82■□□□□ 0.76
RCCD1A6NED2 MYC-208ENST00000641036 567 ntBASIC19.82■□□□□ 0.76
RCCD1A6NED2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.82■□□□□ 0.76
RCCD1A6NED2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
RCCD1A6NED2 MYLKP1-201ENST00000509077 1580 ntBASIC19.82■□□□□ 0.76
RCCD1A6NED2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.82■□□□□ 0.76
RCCD1A6NED2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RCCD1A6NED2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.82■□□□□ 0.76
RCCD1A6NED2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RCCD1A6NED2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RCCD1A6NED2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RCCD1A6NED2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RCCD1A6NED2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RCCD1A6NED2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.81■□□□□ 0.76
RCCD1A6NED2 HTR7P1-201ENST00000538670 1336 ntBASIC19.81■□□□□ 0.76
RCCD1A6NED2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RCCD1A6NED2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RCCD1A6NED2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.81■□□□□ 0.76
RCCD1A6NED2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
RCCD1A6NED2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RCCD1A6NED2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
RCCD1A6NED2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
RCCD1A6NED2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
RCCD1A6NED2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.81■□□□□ 0.76
RCCD1A6NED2 RNA5SP413-201ENST00000516373 109 ntBASIC19.81■□□□□ 0.76
RCCD1A6NED2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
RCCD1A6NED2 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.81■□□□□ 0.76
RCCD1A6NED2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RCCD1A6NED2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.81■□□□□ 0.76
RCCD1A6NED2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RCCD1A6NED2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RCCD1A6NED2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RCCD1A6NED2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RCCD1A6NED2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RCCD1A6NED2 GNAS-203ENST00000306120 1878 ntBASIC19.81■□□□□ 0.76
RCCD1A6NED2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RCCD1A6NED2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RCCD1A6NED2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.81■□□□□ 0.76
RCCD1A6NED2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.81■□□□□ 0.76
RCCD1A6NED2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RCCD1A6NED2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RCCD1A6NED2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.81■□□□□ 0.76
RCCD1A6NED2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.81■□□□□ 0.76
RCCD1A6NED2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RCCD1A6NED2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RCCD1A6NED2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RCCD1A6NED2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
RCCD1A6NED2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
RCCD1A6NED2 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.8■□□□□ 0.76
RCCD1A6NED2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RCCD1A6NED2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
RCCD1A6NED2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RCCD1A6NED2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RCCD1A6NED2 NIFKP9-201ENST00000419265 221 ntBASIC19.8■□□□□ 0.76
RCCD1A6NED2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.8■□□□□ 0.76
RCCD1A6NED2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.8■□□□□ 0.76
RCCD1A6NED2 AC131212.4-201ENST00000623606 975 ntBASIC19.8■□□□□ 0.76
RCCD1A6NED2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RCCD1A6NED2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RCCD1A6NED2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RCCD1A6NED2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RCCD1A6NED2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RCCD1A6NED2 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.79■□□□□ 0.76
RCCD1A6NED2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
RCCD1A6NED2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.79■□□□□ 0.76
RCCD1A6NED2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RCCD1A6NED2 AC012313.1-201ENST00000593393 3059 ntBASIC19.79■□□□□ 0.76
RCCD1A6NED2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RCCD1A6NED2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RCCD1A6NED2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RCCD1A6NED2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RCCD1A6NED2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RCCD1A6NED2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RCCD1A6NED2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.79■□□□□ 0.76
RCCD1A6NED2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RCCD1A6NED2 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.79■□□□□ 0.76
RCCD1A6NED2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RCCD1A6NED2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RCCD1A6NED2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.79■□□□□ 0.76
RCCD1A6NED2 AC099343.3-201ENST00000605834 2503 ntBASIC19.79■□□□□ 0.76
RCCD1A6NED2 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RCCD1A6NED2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RCCD1A6NED2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms