Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AL445228.2-201ENST00000605589 952 ntBASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AC096733.2-201ENST00000609937 1394 ntBASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AC005082.1-201ENST00000413042 2259 ntBASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 SLC25A1P2-201ENST00000430693 912 ntBASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AC010203.1-204ENST00000548782 407 ntBASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV4S1A1TA0A5B7 FEM1AP3-201ENST00000403722 1741 ntBASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 HMGA1P5-201ENST00000412453 271 ntBASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 KRT18P35-201ENST00000510488 1269 ntBASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AC135050.7-201ENST00000624508 2218 ntBASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AC026471.1-201ENST00000564629 3026 ntBASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV4S1A1TA0A5B7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV4S1A1TA0A5B7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV4S1A1TA0A5B7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV4S1A1TA0A5B7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.96□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AC007613.1-201ENST00000572811 2597 ntBASIC14.96□□□□□ -0.01
TCRBV4S1A1TA0A5B7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.96□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV4S1A1TA0A5B7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TCRBV4S1A1TA0A5B7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms