Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV19A0A0A6YYK7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV19A0A0A6YYK7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAV19A0A0A6YYK7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV19A0A0A6YYK7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV19A0A0A6YYK7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 AP002383.4-201ENST00000442518 975 ntBASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 AP002414.4-201ENST00000589764 1148 ntBASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 AC012313.10-201ENST00000623509 926 ntBASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAV19A0A0A6YYK7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
TRAV19A0A0A6YYK7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV19A0A0A6YYK7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV19A0A0A6YYK7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.23■□□□□ 0.67
TRAV19A0A0A6YYK7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TRAV19A0A0A6YYK7 Z83836.1-201ENST00000624605 1642 ntBASIC19.23■□□□□ 0.67
TRAV19A0A0A6YYK7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.23■□□□□ 0.67
TRAV19A0A0A6YYK7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV19A0A0A6YYK7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV19A0A0A6YYK7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV19A0A0A6YYK7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.23■□□□□ 0.67
TRAV19A0A0A6YYK7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.23■□□□□ 0.67
TRAV19A0A0A6YYK7 PRELID1P1-202ENST00000567272 903 ntBASIC19.23■□□□□ 0.67
TRAV19A0A0A6YYK7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
TRAV19A0A0A6YYK7 MIR3180-1-201ENST00000580374 94 ntBASIC19.23■□□□□ 0.67
TRAV19A0A0A6YYK7 MIR3180-3-201ENST00000584616 94 ntBASIC19.23■□□□□ 0.67
TRAV19A0A0A6YYK7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TRAV19A0A0A6YYK7 MTMR9LP-203ENST00000426597 1545 ntBASIC19.23■□□□□ 0.67
TRAV19A0A0A6YYK7 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.23■□□□□ 0.67
TRAV19A0A0A6YYK7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV19A0A0A6YYK7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.23■□□□□ 0.67
TRAV19A0A0A6YYK7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.23■□□□□ 0.67
TRAV19A0A0A6YYK7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV19A0A0A6YYK7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV19A0A0A6YYK7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TRAV19A0A0A6YYK7 KRT18P1-202ENST00000452408 1331 ntBASIC19.23■□□□□ 0.67
TRAV19A0A0A6YYK7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV19A0A0A6YYK7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TRAV19A0A0A6YYK7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV19A0A0A6YYK7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TRAV19A0A0A6YYK7 AL161938.1-201ENST00000569833 2180 ntBASIC19.22■□□□□ 0.67
TRAV19A0A0A6YYK7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV19A0A0A6YYK7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV19A0A0A6YYK7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV19A0A0A6YYK7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV19A0A0A6YYK7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAV19A0A0A6YYK7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
TRAV19A0A0A6YYK7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.22■□□□□ 0.67
TRAV19A0A0A6YYK7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAV19A0A0A6YYK7 AL121894.2-201ENST00000602977 491 ntBASIC19.22■□□□□ 0.67
TRAV19A0A0A6YYK7 AL691432.3-201ENST00000621860 400 ntBASIC19.22■□□□□ 0.67
TRAV19A0A0A6YYK7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV19A0A0A6YYK7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV19A0A0A6YYK7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV19A0A0A6YYK7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.21■□□□□ 0.67
TRAV19A0A0A6YYK7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRAV19A0A0A6YYK7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRAV19A0A0A6YYK7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
TRAV19A0A0A6YYK7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV19A0A0A6YYK7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.21■□□□□ 0.67
TRAV19A0A0A6YYK7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.21■□□□□ 0.67
TRAV19A0A0A6YYK7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV19A0A0A6YYK7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV19A0A0A6YYK7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV19A0A0A6YYK7 AP000593.1-201ENST00000393668 712 ntBASIC19.21■□□□□ 0.67
TRAV19A0A0A6YYK7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.21■□□□□ 0.67
TRAV19A0A0A6YYK7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms