Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
TRAV16A0A0A6YYK6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV16A0A0A6YYK6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV16A0A0A6YYK6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV16A0A0A6YYK6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV16A0A0A6YYK6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV16A0A0A6YYK6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC13.01□□□□□ -0.33
TRAV16A0A0A6YYK6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 AP001271.2-201ENST00000624018 1556 ntBASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 MAX-217ENST00000557277 728 ntTSL 3 BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 AC005829.2-201ENST00000571422 1056 ntBASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 AC099398.1-201ENST00000567919 2776 ntBASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV16A0A0A6YYK6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 AC141586.3-201ENST00000562166 1838 ntBASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 AC068587.6-202ENST00000641839 5619 ntBASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 PNMA6B-201ENST00000538162 1200 ntBASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 GNAS-203ENST00000306120 1878 ntBASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 AC124067.4-201ENST00000519691 2379 ntBASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAV16A0A0A6YYK6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TRAV16A0A0A6YYK6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV16A0A0A6YYK6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TRAV16A0A0A6YYK6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV16A0A0A6YYK6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV16A0A0A6YYK6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV16A0A0A6YYK6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV16A0A0A6YYK6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV16A0A0A6YYK6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms