Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
DDX49Q9Y6V7 KRT18P57-201ENST00000443599 1254 ntBASIC22.38■■□□□ 1.17
DDX49Q9Y6V7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC22.38■■□□□ 1.17
DDX49Q9Y6V7 DUT-205ENST00000558813 769 ntTSL 2 BASIC22.38■■□□□ 1.17
DDX49Q9Y6V7 AC145285.6-201ENST00000604632 637 ntBASIC22.38■■□□□ 1.17
DDX49Q9Y6V7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
DDX49Q9Y6V7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
DDX49Q9Y6V7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC22.38■■□□□ 1.17
DDX49Q9Y6V7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC22.38■■□□□ 1.17
DDX49Q9Y6V7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC22.38■■□□□ 1.17
DDX49Q9Y6V7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
DDX49Q9Y6V7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC22.38■■□□□ 1.17
DDX49Q9Y6V7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
DDX49Q9Y6V7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 AC005521.1-201ENST00000393351 872 ntBASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 AC011506.1-201ENST00000474329 610 ntBASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DDX49Q9Y6V7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
DDX49Q9Y6V7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
DDX49Q9Y6V7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
DDX49Q9Y6V7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
DDX49Q9Y6V7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC22.36■■□□□ 1.17
DDX49Q9Y6V7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DDX49Q9Y6V7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
DDX49Q9Y6V7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DDX49Q9Y6V7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
DDX49Q9Y6V7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
DDX49Q9Y6V7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC22.36■■□□□ 1.17
DDX49Q9Y6V7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC22.36■■□□□ 1.17
DDX49Q9Y6V7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
DDX49Q9Y6V7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
DDX49Q9Y6V7 AL445228.2-201ENST00000605589 952 ntBASIC22.36■■□□□ 1.17
DDX49Q9Y6V7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
DDX49Q9Y6V7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC22.36■■□□□ 1.17
DDX49Q9Y6V7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DDX49Q9Y6V7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DDX49Q9Y6V7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DDX49Q9Y6V7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC22.36■■□□□ 1.17
DDX49Q9Y6V7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DDX49Q9Y6V7 GOLGA6L3-201ENST00000507199 1679 ntBASIC22.36■■□□□ 1.17
DDX49Q9Y6V7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC22.36■■□□□ 1.17
DDX49Q9Y6V7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DDX49Q9Y6V7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
DDX49Q9Y6V7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC22.36■■□□□ 1.17
DDX49Q9Y6V7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DDX49Q9Y6V7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DDX49Q9Y6V7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DDX49Q9Y6V7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
DDX49Q9Y6V7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
DDX49Q9Y6V7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
DDX49Q9Y6V7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
DDX49Q9Y6V7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DDX49Q9Y6V7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC22.35■■□□□ 1.17
DDX49Q9Y6V7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC22.35■■□□□ 1.17
DDX49Q9Y6V7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
DDX49Q9Y6V7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC22.35■■□□□ 1.17
DDX49Q9Y6V7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
DDX49Q9Y6V7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DDX49Q9Y6V7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DDX49Q9Y6V7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC22.35■■□□□ 1.17
DDX49Q9Y6V7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC22.35■■□□□ 1.17
DDX49Q9Y6V7 FITM1-202ENST00000559294 800 ntBASIC22.35■■□□□ 1.17
DDX49Q9Y6V7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC22.35■■□□□ 1.17
DDX49Q9Y6V7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
DDX49Q9Y6V7 AL512353.2-201ENST00000448759 1962 ntBASIC22.35■■□□□ 1.17
DDX49Q9Y6V7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC22.35■■□□□ 1.17
DDX49Q9Y6V7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
DDX49Q9Y6V7 LINC01568-207ENST00000641790 1380 ntBASIC22.35■■□□□ 1.17
DDX49Q9Y6V7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
DDX49Q9Y6V7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms