Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC22.14■■□□□ 1.13
CYP46A1Q9Y6A2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
CYP46A1Q9Y6A2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CYP46A1Q9Y6A2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CYP46A1Q9Y6A2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CYP46A1Q9Y6A2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CYP46A1Q9Y6A2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC22.14■■□□□ 1.13
CYP46A1Q9Y6A2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
CYP46A1Q9Y6A2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CYP46A1Q9Y6A2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CYP46A1Q9Y6A2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CYP46A1Q9Y6A2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CYP46A1Q9Y6A2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CYP46A1Q9Y6A2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CYP46A1Q9Y6A2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CYP46A1Q9Y6A2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CYP46A1Q9Y6A2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CYP46A1Q9Y6A2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
CYP46A1Q9Y6A2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC22.13■■□□□ 1.13
CYP46A1Q9Y6A2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CYP46A1Q9Y6A2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
CYP46A1Q9Y6A2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC22.13■■□□□ 1.13
CYP46A1Q9Y6A2 BUB3-202ENST00000368859 667 ntTSL 3 BASIC22.13■■□□□ 1.13
CYP46A1Q9Y6A2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CYP46A1Q9Y6A2 AL023284.2-201ENST00000405850 579 ntBASIC22.13■■□□□ 1.13
CYP46A1Q9Y6A2 CRYGFP-201ENST00000418459 633 ntBASIC22.13■■□□□ 1.13
CYP46A1Q9Y6A2 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC22.13■■□□□ 1.13
CYP46A1Q9Y6A2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC22.13■■□□□ 1.13
CYP46A1Q9Y6A2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC22.13■■□□□ 1.13
CYP46A1Q9Y6A2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC22.13■■□□□ 1.13
CYP46A1Q9Y6A2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC22.13■■□□□ 1.13
CYP46A1Q9Y6A2 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CYP46A1Q9Y6A2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CYP46A1Q9Y6A2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC22.13■■□□□ 1.13
CYP46A1Q9Y6A2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CYP46A1Q9Y6A2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
CYP46A1Q9Y6A2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC22.13■■□□□ 1.13
CYP46A1Q9Y6A2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
CYP46A1Q9Y6A2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
CYP46A1Q9Y6A2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 GRAMD4P8-201ENST00000605465 1115 ntBASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC22.12■■□□□ 1.13
CYP46A1Q9Y6A2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CYP46A1Q9Y6A2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CYP46A1Q9Y6A2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
CYP46A1Q9Y6A2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CYP46A1Q9Y6A2 GPAT2P1-201ENST00000444924 1672 ntBASIC22.11■■□□□ 1.13
CYP46A1Q9Y6A2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC22.11■■□□□ 1.13
CYP46A1Q9Y6A2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CYP46A1Q9Y6A2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CYP46A1Q9Y6A2 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CYP46A1Q9Y6A2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
CYP46A1Q9Y6A2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC22.11■■□□□ 1.13
CYP46A1Q9Y6A2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC22.11■■□□□ 1.13
CYP46A1Q9Y6A2 CA15P1-201ENST00000481698 905 ntBASIC22.11■■□□□ 1.13
CYP46A1Q9Y6A2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.11■■□□□ 1.13
CYP46A1Q9Y6A2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC22.11■■□□□ 1.13
CYP46A1Q9Y6A2 AP003071.4-201ENST00000562276 1284 ntBASIC22.11■■□□□ 1.13
CYP46A1Q9Y6A2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC22.11■■□□□ 1.13
CYP46A1Q9Y6A2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.11■■□□□ 1.13
CYP46A1Q9Y6A2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
CYP46A1Q9Y6A2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CYP46A1Q9Y6A2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
CYP46A1Q9Y6A2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC22.11■■□□□ 1.13
CYP46A1Q9Y6A2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CYP46A1Q9Y6A2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CYP46A1Q9Y6A2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
CYP46A1Q9Y6A2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CYP46A1Q9Y6A2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC22.11■■□□□ 1.13
CYP46A1Q9Y6A2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
CYP46A1Q9Y6A2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CYP46A1Q9Y6A2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
CYP46A1Q9Y6A2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CYP46A1Q9Y6A2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC22.1■■□□□ 1.13
CYP46A1Q9Y6A2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms