Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN10AQ9Y5Y9 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
SCN10AQ9Y5Y9 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.41■□□□□ 0.86
SCN10AQ9Y5Y9 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.41■□□□□ 0.86
SCN10AQ9Y5Y9 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN10AQ9Y5Y9 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.41■□□□□ 0.86
SCN10AQ9Y5Y9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCN10AQ9Y5Y9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCN10AQ9Y5Y9 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCN10AQ9Y5Y9 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCN10AQ9Y5Y9 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
SCN10AQ9Y5Y9 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCN10AQ9Y5Y9 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.4■□□□□ 0.86
SCN10AQ9Y5Y9 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCN10AQ9Y5Y9 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SCN10AQ9Y5Y9 LINC01711-201ENST00000598340 967 ntBASIC20.4■□□□□ 0.86
SCN10AQ9Y5Y9 IGHV3-41-201ENST00000613121 348 ntBASIC20.4■□□□□ 0.86
SCN10AQ9Y5Y9 BX640515.1-201ENST00000617215 977 ntBASIC20.4■□□□□ 0.86
SCN10AQ9Y5Y9 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.4■□□□□ 0.86
SCN10AQ9Y5Y9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.4■□□□□ 0.86
SCN10AQ9Y5Y9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SCN10AQ9Y5Y9 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SCN10AQ9Y5Y9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCN10AQ9Y5Y9 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
SCN10AQ9Y5Y9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.39■□□□□ 0.86
SCN10AQ9Y5Y9 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.39■□□□□ 0.86
SCN10AQ9Y5Y9 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCN10AQ9Y5Y9 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SCN10AQ9Y5Y9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.39■□□□□ 0.86
SCN10AQ9Y5Y9 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.39■□□□□ 0.86
SCN10AQ9Y5Y9 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.39■□□□□ 0.86
SCN10AQ9Y5Y9 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SCN10AQ9Y5Y9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SCN10AQ9Y5Y9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCN10AQ9Y5Y9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.39■□□□□ 0.86
SCN10AQ9Y5Y9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.39■□□□□ 0.85
SCN10AQ9Y5Y9 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCN10AQ9Y5Y9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SCN10AQ9Y5Y9 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCN10AQ9Y5Y9 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCN10AQ9Y5Y9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCN10AQ9Y5Y9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SCN10AQ9Y5Y9 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCN10AQ9Y5Y9 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.39■□□□□ 0.85
SCN10AQ9Y5Y9 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.39■□□□□ 0.85
SCN10AQ9Y5Y9 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.39■□□□□ 0.85
SCN10AQ9Y5Y9 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCN10AQ9Y5Y9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.39■□□□□ 0.85
SCN10AQ9Y5Y9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.38■□□□□ 0.85
SCN10AQ9Y5Y9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.38■□□□□ 0.85
SCN10AQ9Y5Y9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
SCN10AQ9Y5Y9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SCN10AQ9Y5Y9 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCN10AQ9Y5Y9 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SCN10AQ9Y5Y9 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SCN10AQ9Y5Y9 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCN10AQ9Y5Y9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SCN10AQ9Y5Y9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCN10AQ9Y5Y9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCN10AQ9Y5Y9 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCN10AQ9Y5Y9 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SCN10AQ9Y5Y9 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.38■□□□□ 0.85
SCN10AQ9Y5Y9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SCN10AQ9Y5Y9 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCN10AQ9Y5Y9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCN10AQ9Y5Y9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCN10AQ9Y5Y9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.38■□□□□ 0.85
SCN10AQ9Y5Y9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.37■□□□□ 0.85
SCN10AQ9Y5Y9 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCN10AQ9Y5Y9 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCN10AQ9Y5Y9 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
SCN10AQ9Y5Y9 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SCN10AQ9Y5Y9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCN10AQ9Y5Y9 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.37■□□□□ 0.85
SCN10AQ9Y5Y9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCN10AQ9Y5Y9 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.37■□□□□ 0.85
SCN10AQ9Y5Y9 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.37■□□□□ 0.85
SCN10AQ9Y5Y9 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCN10AQ9Y5Y9 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCN10AQ9Y5Y9 AC018712.1-201ENST00000455767 687 ntBASIC20.37■□□□□ 0.85
SCN10AQ9Y5Y9 AP001005.1-201ENST00000571755 1248 ntBASIC20.37■□□□□ 0.85
SCN10AQ9Y5Y9 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SCN10AQ9Y5Y9 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.37■□□□□ 0.85
SCN10AQ9Y5Y9 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.37■□□□□ 0.85
SCN10AQ9Y5Y9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.37■□□□□ 0.85
SCN10AQ9Y5Y9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.37■□□□□ 0.85
SCN10AQ9Y5Y9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SCN10AQ9Y5Y9 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.37■□□□□ 0.85
SCN10AQ9Y5Y9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SCN10AQ9Y5Y9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
SCN10AQ9Y5Y9 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.36■□□□□ 0.85
SCN10AQ9Y5Y9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SCN10AQ9Y5Y9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.36■□□□□ 0.85
SCN10AQ9Y5Y9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
SCN10AQ9Y5Y9 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.36■□□□□ 0.85
SCN10AQ9Y5Y9 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.36■□□□□ 0.85
SCN10AQ9Y5Y9 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCN10AQ9Y5Y9 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCN10AQ9Y5Y9 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCN10AQ9Y5Y9 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms