Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 SEC1P-202ENST00000473944 940 ntBASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 KRT8P7-201ENST00000533003 1432 ntBASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 HOXB1-202ENST00000577092 1414 ntBASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 AP000974.1-201ENST00000623909 2387 ntBASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 KRT18P38-201ENST00000449496 1282 ntBASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX9Q9Y5X1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX9Q9Y5X1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX9Q9Y5X1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX9Q9Y5X1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX9Q9Y5X1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX9Q9Y5X1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.93■□□□□ 0.78
SNX9Q9Y5X1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.93■□□□□ 0.78
SNX9Q9Y5X1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNX9Q9Y5X1 AC087388.1-201ENST00000571370 1112 ntBASIC19.93■□□□□ 0.78
SNX9Q9Y5X1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.93■□□□□ 0.78
SNX9Q9Y5X1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX9Q9Y5X1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX9Q9Y5X1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNX9Q9Y5X1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.93■□□□□ 0.78
SNX9Q9Y5X1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX9Q9Y5X1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SNX9Q9Y5X1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNX9Q9Y5X1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX9Q9Y5X1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 STARP1-201ENST00000397973 869 ntBASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 SPDYE15P-201ENST00000424157 909 ntBASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.92■□□□□ 0.78
SNX9Q9Y5X1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms