Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 AL358472.4-201ENST00000633140 710 ntBASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
HRH3Q9Y5N1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.21■□□□□ 0.34
HRH3Q9Y5N1 KRT8P3-201ENST00000519669 1449 ntBASIC17.21■□□□□ 0.34
HRH3Q9Y5N1 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.21■□□□□ 0.34
HRH3Q9Y5N1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HRH3Q9Y5N1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HRH3Q9Y5N1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HRH3Q9Y5N1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HRH3Q9Y5N1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HRH3Q9Y5N1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HRH3Q9Y5N1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HRH3Q9Y5N1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.2■□□□□ 0.34
HRH3Q9Y5N1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HRH3Q9Y5N1 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
HRH3Q9Y5N1 COX11P1-201ENST00000489116 835 ntBASIC17.2■□□□□ 0.34
HRH3Q9Y5N1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.2■□□□□ 0.34
HRH3Q9Y5N1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.2■□□□□ 0.34
HRH3Q9Y5N1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.2■□□□□ 0.34
HRH3Q9Y5N1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
HRH3Q9Y5N1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
HRH3Q9Y5N1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
HRH3Q9Y5N1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HRH3Q9Y5N1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HRH3Q9Y5N1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HRH3Q9Y5N1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HRH3Q9Y5N1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.2■□□□□ 0.34
HRH3Q9Y5N1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HRH3Q9Y5N1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HRH3Q9Y5N1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 AL023284.2-201ENST00000405850 579 ntBASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HRH3Q9Y5N1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HRH3Q9Y5N1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.18■□□□□ 0.34
HRH3Q9Y5N1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
HRH3Q9Y5N1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HRH3Q9Y5N1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HRH3Q9Y5N1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HRH3Q9Y5N1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HRH3Q9Y5N1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HRH3Q9Y5N1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.18■□□□□ 0.34
HRH3Q9Y5N1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HRH3Q9Y5N1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.18■□□□□ 0.34
HRH3Q9Y5N1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.18■□□□□ 0.34
HRH3Q9Y5N1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.18■□□□□ 0.34
HRH3Q9Y5N1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HRH3Q9Y5N1 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HRH3Q9Y5N1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.18■□□□□ 0.34
HRH3Q9Y5N1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HRH3Q9Y5N1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HRH3Q9Y5N1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HRH3Q9Y5N1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.18■□□□□ 0.34
HRH3Q9Y5N1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HRH3Q9Y5N1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HRH3Q9Y5N1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HRH3Q9Y5N1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.18■□□□□ 0.34
HRH3Q9Y5N1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HRH3Q9Y5N1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.18■□□□□ 0.34
HRH3Q9Y5N1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms