Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.08■□□□□ 0.16
MRPS28Q9Y2Q9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.08■□□□□ 0.16
MRPS28Q9Y2Q9 AC008403.3-201ENST00000598924 454 ntBASIC16.08■□□□□ 0.16
MRPS28Q9Y2Q9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.08■□□□□ 0.16
MRPS28Q9Y2Q9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.08■□□□□ 0.16
MRPS28Q9Y2Q9 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.08■□□□□ 0.16
MRPS28Q9Y2Q9 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
MRPS28Q9Y2Q9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRPS28Q9Y2Q9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
MRPS28Q9Y2Q9 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRPS28Q9Y2Q9 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRPS28Q9Y2Q9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
MRPS28Q9Y2Q9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MRPS28Q9Y2Q9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MRPS28Q9Y2Q9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 KRT17P3-201ENST00000420566 1262 ntBASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 POU5F1P3-201ENST00000428824 1078 ntBASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 AC104771.1-201ENST00000603335 964 ntBASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 MTDHP1-201ENST00000605323 784 ntBASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 KRT8P11-201ENST00000409686 1436 ntBASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPS28Q9Y2Q9 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 KRT8P32-201ENST00000512863 1461 ntBASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 AP003097.1-201ENST00000530657 1135 ntBASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 AC069544.1-201ENST00000609399 999 ntBASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPS28Q9Y2Q9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 ID1-201ENST00000376105 1233 ntBASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms