Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 AC004911.1-201ENST00000416316 871 ntBASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 AC006015.1-201ENST00000429970 570 ntBASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LRCH1Q9Y2L9 AC087633.2-202ENST00000565166 1439 ntBASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 AC104187.1-201ENST00000607510 612 ntBASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 FEM1AP3-201ENST00000403722 1741 ntBASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 AP001094.4-201ENST00000579008 2176 ntBASIC17.72■□□□□ 0.43
LRCH1Q9Y2L9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.71■□□□□ 0.43
LRCH1Q9Y2L9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRCH1Q9Y2L9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
LRCH1Q9Y2L9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRCH1Q9Y2L9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.71■□□□□ 0.42
LRCH1Q9Y2L9 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms