Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 AC008622.2-201ENST00000617006 1229 ntBASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS9D1Q9Y2B5 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 TSPY7P-201ENST00000431358 1114 ntBASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 SERPINA7P1-201ENST00000443077 631 ntBASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 CCR12P-201ENST00000446203 998 ntBASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 AC008556.1-201ENST00000610908 2040 ntBASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VPS9D1Q9Y2B5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 MIR564-202ENST00000385049 94 ntBASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 FITM1-202ENST00000559294 800 ntBASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.53■□□□□ 0.56
VPS9D1Q9Y2B5 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
VPS9D1Q9Y2B5 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VPS9D1Q9Y2B5 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS9D1Q9Y2B5 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.52■□□□□ 0.56
VPS9D1Q9Y2B5 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS9D1Q9Y2B5 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS9D1Q9Y2B5 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS9D1Q9Y2B5 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.52■□□□□ 0.56
VPS9D1Q9Y2B5 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VPS9D1Q9Y2B5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
VPS9D1Q9Y2B5 C2orf69P3-201ENST00000565542 1120 ntBASIC18.52■□□□□ 0.56
VPS9D1Q9Y2B5 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS9D1Q9Y2B5 MIR3180-5-201ENST00000583743 153 ntBASIC18.52■□□□□ 0.56
VPS9D1Q9Y2B5 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.52■□□□□ 0.56
VPS9D1Q9Y2B5 GPAT2P1-201ENST00000444924 1672 ntBASIC18.52■□□□□ 0.56
VPS9D1Q9Y2B5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS9D1Q9Y2B5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VPS9D1Q9Y2B5 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms