Protein–RNA interactions for Protein: Q9UHI6

DDX20, Probable ATP-dependent RNA helicase DDX20, humanhuman

Known RBP Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX20Q9UHI6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX20Q9UHI6 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX20Q9UHI6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.07■□□□□ 0.96
DDX20Q9UHI6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX20Q9UHI6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX20Q9UHI6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX20Q9UHI6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.06■□□□□ 0.96
DDX20Q9UHI6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX20Q9UHI6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
DDX20Q9UHI6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX20Q9UHI6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX20Q9UHI6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DDX20Q9UHI6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.06■□□□□ 0.96
DDX20Q9UHI6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX20Q9UHI6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DDX20Q9UHI6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DDX20Q9UHI6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.06■□□□□ 0.96
DDX20Q9UHI6 IGHV3-41-201ENST00000613121 348 ntBASIC21.06■□□□□ 0.96
DDX20Q9UHI6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
DDX20Q9UHI6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
DDX20Q9UHI6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.06■□□□□ 0.96
DDX20Q9UHI6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX20Q9UHI6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX20Q9UHI6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DDX20Q9UHI6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DDX20Q9UHI6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX20Q9UHI6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DDX20Q9UHI6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX20Q9UHI6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX20Q9UHI6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
DDX20Q9UHI6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.05■□□□□ 0.96
DDX20Q9UHI6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.05■□□□□ 0.96
DDX20Q9UHI6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX20Q9UHI6 AP003733.1-201ENST00000491725 852 ntBASIC21.05■□□□□ 0.96
DDX20Q9UHI6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.05■□□□□ 0.96
DDX20Q9UHI6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.05■□□□□ 0.96
DDX20Q9UHI6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.05■□□□□ 0.96
DDX20Q9UHI6 AL390719.2-201ENST00000606993 987 ntBASIC21.05■□□□□ 0.96
DDX20Q9UHI6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX20Q9UHI6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DDX20Q9UHI6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DDX20Q9UHI6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX20Q9UHI6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX20Q9UHI6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.05■□□□□ 0.96
DDX20Q9UHI6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX20Q9UHI6 HLA-A-201ENST00000376802 1334 ntBASIC21.04■□□□□ 0.96
DDX20Q9UHI6 LINC00167-201ENST00000530583 1419 ntBASIC21.04■□□□□ 0.96
DDX20Q9UHI6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
DDX20Q9UHI6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DDX20Q9UHI6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
DDX20Q9UHI6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DDX20Q9UHI6 KRT18P23-201ENST00000435622 1283 ntBASIC21.04■□□□□ 0.96
DDX20Q9UHI6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.04■□□□□ 0.96
DDX20Q9UHI6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC21.04■□□□□ 0.96
DDX20Q9UHI6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.04■□□□□ 0.96
DDX20Q9UHI6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.04■□□□□ 0.96
DDX20Q9UHI6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.04■□□□□ 0.96
DDX20Q9UHI6 AC099336.1-202ENST00000602961 463 ntBASIC21.04■□□□□ 0.96
DDX20Q9UHI6 AC010240.3-201ENST00000607688 395 ntBASIC21.04■□□□□ 0.96
DDX20Q9UHI6 AC120114.3-201ENST00000611923 658 ntBASIC21.04■□□□□ 0.96
DDX20Q9UHI6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.04■□□□□ 0.96
DDX20Q9UHI6 AC233702.3-201ENST00000578656 1387 ntBASIC21.04■□□□□ 0.96
DDX20Q9UHI6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.04■□□□□ 0.96
DDX20Q9UHI6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.04■□□□□ 0.96
DDX20Q9UHI6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX20Q9UHI6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DDX20Q9UHI6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DDX20Q9UHI6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX20Q9UHI6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.04■□□□□ 0.96
DDX20Q9UHI6 AC018445.3-201ENST00000624177 1945 ntBASIC21.04■□□□□ 0.96
DDX20Q9UHI6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX20Q9UHI6 KRT8P7-201ENST00000533003 1432 ntBASIC21.04■□□□□ 0.96
DDX20Q9UHI6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DDX20Q9UHI6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX20Q9UHI6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
DDX20Q9UHI6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
DDX20Q9UHI6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
DDX20Q9UHI6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX20Q9UHI6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX20Q9UHI6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.03■□□□□ 0.96
DDX20Q9UHI6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX20Q9UHI6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
DDX20Q9UHI6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX20Q9UHI6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX20Q9UHI6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX20Q9UHI6 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DDX20Q9UHI6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC21.03■□□□□ 0.96
DDX20Q9UHI6 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.03■□□□□ 0.96
DDX20Q9UHI6 AC104390.1-201ENST00000555663 520 ntBASIC21.03■□□□□ 0.96
DDX20Q9UHI6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.03■□□□□ 0.96
DDX20Q9UHI6 AL671883.3-201ENST00000603274 991 ntBASIC21.03■□□□□ 0.96
DDX20Q9UHI6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.03■□□□□ 0.96
DDX20Q9UHI6 BX640515.1-201ENST00000617215 977 ntBASIC21.03■□□□□ 0.96
DDX20Q9UHI6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX20Q9UHI6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DDX20Q9UHI6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX20Q9UHI6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX20Q9UHI6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
DDX20Q9UHI6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX20Q9UHI6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms