Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC29.56■■■□□ 2.32
RIMBP3Q9UFD9 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC29.56■■■□□ 2.32
RIMBP3Q9UFD9 AC109322.1-201ENST00000524499 1264 ntBASIC29.56■■■□□ 2.32
RIMBP3Q9UFD9 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC29.56■■■□□ 2.32
RIMBP3Q9UFD9 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
RIMBP3Q9UFD9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
RIMBP3Q9UFD9 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC29.55■■■□□ 2.32
RIMBP3Q9UFD9 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RIMBP3Q9UFD9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
RIMBP3Q9UFD9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC29.55■■■□□ 2.32
RIMBP3Q9UFD9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RIMBP3Q9UFD9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC29.55■■■□□ 2.32
RIMBP3Q9UFD9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
RIMBP3Q9UFD9 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
RIMBP3Q9UFD9 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC29.55■■■□□ 2.32
RIMBP3Q9UFD9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC29.55■■■□□ 2.32
RIMBP3Q9UFD9 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC29.55■■■□□ 2.32
RIMBP3Q9UFD9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
RIMBP3Q9UFD9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC29.55■■■□□ 2.32
RIMBP3Q9UFD9 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RIMBP3Q9UFD9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC29.54■■■□□ 2.32
RIMBP3Q9UFD9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
RIMBP3Q9UFD9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC29.54■■■□□ 2.32
RIMBP3Q9UFD9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC29.54■■■□□ 2.32
RIMBP3Q9UFD9 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC29.54■■■□□ 2.32
RIMBP3Q9UFD9 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
RIMBP3Q9UFD9 AC002472.2-201ENST00000442739 958 ntBASIC29.54■■■□□ 2.32
RIMBP3Q9UFD9 NMU-203ENST00000507338 658 ntTSL 3 BASIC29.54■■■□□ 2.32
RIMBP3Q9UFD9 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC29.54■■■□□ 2.32
RIMBP3Q9UFD9 CECR7-204ENST00000609932 568 ntTSL 2 BASIC29.54■■■□□ 2.32
RIMBP3Q9UFD9 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
RIMBP3Q9UFD9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC29.54■■■□□ 2.32
RIMBP3Q9UFD9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC29.54■■■□□ 2.32
RIMBP3Q9UFD9 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC29.54■■■□□ 2.32
RIMBP3Q9UFD9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
RIMBP3Q9UFD9 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
RIMBP3Q9UFD9 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC29.53■■■□□ 2.32
RIMBP3Q9UFD9 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
RIMBP3Q9UFD9 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC29.53■■■□□ 2.32
RIMBP3Q9UFD9 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
RIMBP3Q9UFD9 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC29.53■■■□□ 2.32
RIMBP3Q9UFD9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
RIMBP3Q9UFD9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
RIMBP3Q9UFD9 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC29.53■■■□□ 2.32
RIMBP3Q9UFD9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC29.53■■■□□ 2.32
RIMBP3Q9UFD9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
RIMBP3Q9UFD9 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
RIMBP3Q9UFD9 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
RIMBP3Q9UFD9 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
RIMBP3Q9UFD9 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
RIMBP3Q9UFD9 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
RIMBP3Q9UFD9 AC093214.1-201ENST00000511688 1107 ntBASIC29.53■■■□□ 2.32
RIMBP3Q9UFD9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC29.53■■■□□ 2.32
RIMBP3Q9UFD9 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
RIMBP3Q9UFD9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC29.52■■■□□ 2.32
RIMBP3Q9UFD9 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RIMBP3Q9UFD9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC29.52■■■□□ 2.32
RIMBP3Q9UFD9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
RIMBP3Q9UFD9 AP005212.1-201ENST00000581547 1997 ntBASIC29.52■■■□□ 2.32
RIMBP3Q9UFD9 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RIMBP3Q9UFD9 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RIMBP3Q9UFD9 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
RIMBP3Q9UFD9 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
RIMBP3Q9UFD9 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC29.52■■■□□ 2.32
RIMBP3Q9UFD9 AL359881.2-201ENST00000602973 570 ntBASIC29.52■■■□□ 2.32
RIMBP3Q9UFD9 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RIMBP3Q9UFD9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
RIMBP3Q9UFD9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RIMBP3Q9UFD9 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC29.51■■■□□ 2.32
RIMBP3Q9UFD9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
RIMBP3Q9UFD9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
RIMBP3Q9UFD9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC29.51■■■□□ 2.31
RIMBP3Q9UFD9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC29.51■■■□□ 2.31
RIMBP3Q9UFD9 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
RIMBP3Q9UFD9 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC29.51■■■□□ 2.31
RIMBP3Q9UFD9 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC29.51■■■□□ 2.31
RIMBP3Q9UFD9 CCND1-203ENST00000536559 553 ntTSL 3 BASIC29.51■■■□□ 2.31
RIMBP3Q9UFD9 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC29.51■■■□□ 2.31
RIMBP3Q9UFD9 AC004449.1-201ENST00000564240 433 ntBASIC29.51■■■□□ 2.31
RIMBP3Q9UFD9 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
RIMBP3Q9UFD9 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
RIMBP3Q9UFD9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC29.51■■■□□ 2.31
RIMBP3Q9UFD9 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
RIMBP3Q9UFD9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC29.51■■■□□ 2.31
RIMBP3Q9UFD9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
RIMBP3Q9UFD9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC29.5■■■□□ 2.31
RIMBP3Q9UFD9 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
RIMBP3Q9UFD9 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC29.5■■■□□ 2.31
RIMBP3Q9UFD9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC29.5■■■□□ 2.31
RIMBP3Q9UFD9 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC29.5■■■□□ 2.31
RIMBP3Q9UFD9 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
RIMBP3Q9UFD9 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC29.5■■■□□ 2.31
RIMBP3Q9UFD9 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC29.5■■■□□ 2.31
RIMBP3Q9UFD9 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
RIMBP3Q9UFD9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC29.5■■■□□ 2.31
RIMBP3Q9UFD9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
RIMBP3Q9UFD9 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC29.5■■■□□ 2.31
RIMBP3Q9UFD9 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
RIMBP3Q9UFD9 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
RIMBP3Q9UFD9 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC29.5■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms