Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 AC134043.2-201ENST00000624206 2238 ntBASIC17.04■□□□□ 0.32
CLN6Q9NWW5 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 HEIH-201ENST00000623091 1652 ntBASIC17.04■□□□□ 0.32
CLN6Q9NWW5 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLN6Q9NWW5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLN6Q9NWW5 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLN6Q9NWW5 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLN6Q9NWW5 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CLN6Q9NWW5 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.03■□□□□ 0.32
CLN6Q9NWW5 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.03■□□□□ 0.32
CLN6Q9NWW5 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CLN6Q9NWW5 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLN6Q9NWW5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.03■□□□□ 0.32
CLN6Q9NWW5 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLN6Q9NWW5 MIR663A-201ENST00000385250 93 ntBASIC17.03■□□□□ 0.32
CLN6Q9NWW5 CDCA4P2-201ENST00000441182 718 ntBASIC17.03■□□□□ 0.32
CLN6Q9NWW5 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.03■□□□□ 0.32
CLN6Q9NWW5 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.03■□□□□ 0.32
CLN6Q9NWW5 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.03■□□□□ 0.32
CLN6Q9NWW5 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLN6Q9NWW5 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLN6Q9NWW5 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLN6Q9NWW5 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CLN6Q9NWW5 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLN6Q9NWW5 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLN6Q9NWW5 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.03■□□□□ 0.32
CLN6Q9NWW5 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.03■□□□□ 0.32
CLN6Q9NWW5 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLN6Q9NWW5 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.03■□□□□ 0.32
CLN6Q9NWW5 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLN6Q9NWW5 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLN6Q9NWW5 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLN6Q9NWW5 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CLN6Q9NWW5 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLN6Q9NWW5 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.02■□□□□ 0.32
CLN6Q9NWW5 LINC00896-202ENST00000609602 2128 ntBASIC17.02■□□□□ 0.32
CLN6Q9NWW5 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLN6Q9NWW5 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLN6Q9NWW5 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLN6Q9NWW5 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLN6Q9NWW5 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLN6Q9NWW5 SLC25A6P5-201ENST00000435663 894 ntBASIC17.02■□□□□ 0.32
CLN6Q9NWW5 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.02■□□□□ 0.32
CLN6Q9NWW5 AC026185.1-201ENST00000445748 174 ntBASIC17.02■□□□□ 0.32
CLN6Q9NWW5 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.02■□□□□ 0.32
CLN6Q9NWW5 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLN6Q9NWW5 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
CLN6Q9NWW5 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.02■□□□□ 0.32
CLN6Q9NWW5 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.02■□□□□ 0.32
CLN6Q9NWW5 AC092118.2-201ENST00000613495 667 ntBASIC17.02■□□□□ 0.32
CLN6Q9NWW5 MYC-208ENST00000641036 567 ntBASIC17.02■□□□□ 0.32
CLN6Q9NWW5 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLN6Q9NWW5 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.02■□□□□ 0.32
CLN6Q9NWW5 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLN6Q9NWW5 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLN6Q9NWW5 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLN6Q9NWW5 AC135776.1-201ENST00000319817 2481 ntBASIC17.02■□□□□ 0.31
CLN6Q9NWW5 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLN6Q9NWW5 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.02■□□□□ 0.31
CLN6Q9NWW5 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 PRORSD1P-202ENST00000563365 2154 ntBASIC17.01■□□□□ 0.31
CLN6Q9NWW5 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CLN6Q9NWW5 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17■□□□□ 0.31
CLN6Q9NWW5 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CLN6Q9NWW5 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLN6Q9NWW5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms