Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.33■□□□□ 0.36
POLE3Q9NRF9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
POLE3Q9NRF9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
POLE3Q9NRF9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
POLE3Q9NRF9 AC073592.3-201ENST00000625118 1834 ntBASIC17.33■□□□□ 0.36
POLE3Q9NRF9 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
POLE3Q9NRF9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 Z99916.2-201ENST00000604037 246 ntBASIC17.32■□□□□ 0.36
POLE3Q9NRF9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
POLE3Q9NRF9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 AC079598.2-202ENST00000546624 1451 ntBASIC17.31■□□□□ 0.36
POLE3Q9NRF9 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 AC008550.1-201ENST00000511500 884 ntBASIC17.31■□□□□ 0.36
POLE3Q9NRF9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLE3Q9NRF9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
POLE3Q9NRF9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
POLE3Q9NRF9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLE3Q9NRF9 KRT8P45-201ENST00000414328 1447 ntBASIC17.3■□□□□ 0.36
POLE3Q9NRF9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLE3Q9NRF9 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.3■□□□□ 0.36
POLE3Q9NRF9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.3■□□□□ 0.36
POLE3Q9NRF9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.3■□□□□ 0.36
POLE3Q9NRF9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.3■□□□□ 0.36
POLE3Q9NRF9 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
POLE3Q9NRF9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
POLE3Q9NRF9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
POLE3Q9NRF9 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.3■□□□□ 0.36
POLE3Q9NRF9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLE3Q9NRF9 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLE3Q9NRF9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
POLE3Q9NRF9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.3■□□□□ 0.36
POLE3Q9NRF9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
POLE3Q9NRF9 KRT18P41-201ENST00000518924 1277 ntBASIC17.3■□□□□ 0.36
POLE3Q9NRF9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
POLE3Q9NRF9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.3■□□□□ 0.36
POLE3Q9NRF9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms