Protein–RNA interactions for Protein: Q9NR80

ARHGEF4, Rho guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4Q9NR80 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.53■□□□□ 0.72
ARHGEF4Q9NR80 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ARHGEF4Q9NR80 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ARHGEF4Q9NR80 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ARHGEF4Q9NR80 UPK3BP1-201ENST00000428678 509 ntBASIC19.53■□□□□ 0.72
ARHGEF4Q9NR80 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.53■□□□□ 0.72
ARHGEF4Q9NR80 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.53■□□□□ 0.72
ARHGEF4Q9NR80 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.53■□□□□ 0.72
ARHGEF4Q9NR80 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.53■□□□□ 0.72
ARHGEF4Q9NR80 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.53■□□□□ 0.72
ARHGEF4Q9NR80 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ARHGEF4Q9NR80 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.53■□□□□ 0.72
ARHGEF4Q9NR80 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.53■□□□□ 0.72
ARHGEF4Q9NR80 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
ARHGEF4Q9NR80 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ARHGEF4Q9NR80 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ARHGEF4Q9NR80 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
ARHGEF4Q9NR80 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
ARHGEF4Q9NR80 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF4Q9NR80 KRT8P3-201ENST00000519669 1449 ntBASIC19.52■□□□□ 0.72
ARHGEF4Q9NR80 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF4Q9NR80 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF4Q9NR80 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF4Q9NR80 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.52■□□□□ 0.72
ARHGEF4Q9NR80 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF4Q9NR80 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF4Q9NR80 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.52■□□□□ 0.72
ARHGEF4Q9NR80 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF4Q9NR80 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF4Q9NR80 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.52■□□□□ 0.72
ARHGEF4Q9NR80 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.52■□□□□ 0.72
ARHGEF4Q9NR80 AL441883.1-201ENST00000566170 1045 ntBASIC19.52■□□□□ 0.72
ARHGEF4Q9NR80 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF4Q9NR80 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF4Q9NR80 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.52■□□□□ 0.72
ARHGEF4Q9NR80 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.52■□□□□ 0.72
ARHGEF4Q9NR80 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
ARHGEF4Q9NR80 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF4Q9NR80 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ARHGEF4Q9NR80 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.52■□□□□ 0.72
ARHGEF4Q9NR80 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
ARHGEF4Q9NR80 AC093525.10-201ENST00000625130 1569 ntBASIC19.52■□□□□ 0.71
ARHGEF4Q9NR80 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
ARHGEF4Q9NR80 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.52■□□□□ 0.71
ARHGEF4Q9NR80 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
ARHGEF4Q9NR80 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
ARHGEF4Q9NR80 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF4Q9NR80 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF4Q9NR80 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF4Q9NR80 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF4Q9NR80 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF4Q9NR80 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF4Q9NR80 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF4Q9NR80 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.51■□□□□ 0.71
ARHGEF4Q9NR80 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.51■□□□□ 0.71
ARHGEF4Q9NR80 AL359075.1-203ENST00000462729 1002 ntBASIC19.51■□□□□ 0.71
ARHGEF4Q9NR80 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF4Q9NR80 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF4Q9NR80 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF4Q9NR80 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
ARHGEF4Q9NR80 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.51■□□□□ 0.71
ARHGEF4Q9NR80 AL031598.1-201ENST00000561511 1773 ntBASIC19.51■□□□□ 0.71
ARHGEF4Q9NR80 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF4Q9NR80 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF4Q9NR80 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
ARHGEF4Q9NR80 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF4Q9NR80 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF4Q9NR80 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF4Q9NR80 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF4Q9NR80 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.51■□□□□ 0.71
ARHGEF4Q9NR80 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF4Q9NR80 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ARHGEF4Q9NR80 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARHGEF4Q9NR80 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 AC005082.1-201ENST00000413042 2259 ntBASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 AL512353.2-201ENST00000448759 1962 ntBASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms