Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 Z85996.1-201ENST00000494644 937 ntBASIC16.86■□□□□ 0.29
HINT3Q9NQE9 AC093827.2-201ENST00000512654 315 ntBASIC16.86■□□□□ 0.29
HINT3Q9NQE9 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 LTB4R2-202ENST00000528054 3092 ntBASIC16.86■□□□□ 0.29
HINT3Q9NQE9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HINT3Q9NQE9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HINT3Q9NQE9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HINT3Q9NQE9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
HINT3Q9NQE9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HINT3Q9NQE9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
HINT3Q9NQE9 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HINT3Q9NQE9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.85■□□□□ 0.29
HINT3Q9NQE9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.85■□□□□ 0.29
HINT3Q9NQE9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.85■□□□□ 0.29
HINT3Q9NQE9 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HINT3Q9NQE9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.85■□□□□ 0.29
HINT3Q9NQE9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.85■□□□□ 0.29
HINT3Q9NQE9 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.85■□□□□ 0.29
HINT3Q9NQE9 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HINT3Q9NQE9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HINT3Q9NQE9 AC008764.6-201ENST00000595909 2069 ntBASIC16.85■□□□□ 0.29
HINT3Q9NQE9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.85■□□□□ 0.29
HINT3Q9NQE9 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.85■□□□□ 0.29
HINT3Q9NQE9 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HINT3Q9NQE9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.85■□□□□ 0.29
HINT3Q9NQE9 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HINT3Q9NQE9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 KRT8P32-201ENST00000512863 1461 ntBASIC16.84■□□□□ 0.29
HINT3Q9NQE9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HINT3Q9NQE9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.83■□□□□ 0.29
HINT3Q9NQE9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
HINT3Q9NQE9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
HINT3Q9NQE9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.83■□□□□ 0.29
HINT3Q9NQE9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
HINT3Q9NQE9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
HINT3Q9NQE9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HINT3Q9NQE9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HINT3Q9NQE9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HINT3Q9NQE9 AC135776.1-201ENST00000319817 2481 ntBASIC16.83■□□□□ 0.28
HINT3Q9NQE9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HINT3Q9NQE9 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HINT3Q9NQE9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.83■□□□□ 0.28
HINT3Q9NQE9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
HINT3Q9NQE9 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
HINT3Q9NQE9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.83■□□□□ 0.28
HINT3Q9NQE9 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.83■□□□□ 0.28
HINT3Q9NQE9 KRT8P11-201ENST00000409686 1436 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms