Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
RTN4Q9NQC3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RTN4Q9NQC3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTN4Q9NQC3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTN4Q9NQC3 AC087633.2-202ENST00000565166 1439 ntBASIC21.97■■□□□ 1.11
RTN4Q9NQC3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
RTN4Q9NQC3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
RTN4Q9NQC3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTN4Q9NQC3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
RTN4Q9NQC3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
RTN4Q9NQC3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RTN4Q9NQC3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTN4Q9NQC3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RTN4Q9NQC3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
RTN4Q9NQC3 KRT19P1-201ENST00000405746 1186 ntBASIC21.97■■□□□ 1.11
RTN4Q9NQC3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.97■■□□□ 1.11
RTN4Q9NQC3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RTN4Q9NQC3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.97■■□□□ 1.11
RTN4Q9NQC3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RTN4Q9NQC3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC21.97■■□□□ 1.11
RTN4Q9NQC3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTN4Q9NQC3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RTN4Q9NQC3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTN4Q9NQC3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC21.97■■□□□ 1.11
RTN4Q9NQC3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTN4Q9NQC3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
RTN4Q9NQC3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTN4Q9NQC3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC21.97■■□□□ 1.11
RTN4Q9NQC3 AL031598.1-201ENST00000561511 1773 ntBASIC21.97■■□□□ 1.11
RTN4Q9NQC3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
RTN4Q9NQC3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 FP475955.4-201ENST00000623131 1990 ntBASIC21.96■■□□□ 1.11
RTN4Q9NQC3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 AC007216.2-201ENST00000562802 384 ntTSL 3 BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RTN4Q9NQC3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
RTN4Q9NQC3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
RTN4Q9NQC3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
RTN4Q9NQC3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTN4Q9NQC3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTN4Q9NQC3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.95■■□□□ 1.1
RTN4Q9NQC3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC21.95■■□□□ 1.1
RTN4Q9NQC3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC21.95■■□□□ 1.1
RTN4Q9NQC3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTN4Q9NQC3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTN4Q9NQC3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.95■■□□□ 1.1
RTN4Q9NQC3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.95■■□□□ 1.1
RTN4Q9NQC3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTN4Q9NQC3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.95■■□□□ 1.1
RTN4Q9NQC3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
RTN4Q9NQC3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.95■■□□□ 1.1
RTN4Q9NQC3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTN4Q9NQC3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
RTN4Q9NQC3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTN4Q9NQC3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTN4Q9NQC3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTN4Q9NQC3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTN4Q9NQC3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTN4Q9NQC3 PCDHA1-201ENST00000378133 2726 ntBASIC21.94■■□□□ 1.1
RTN4Q9NQC3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTN4Q9NQC3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTN4Q9NQC3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTN4Q9NQC3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTN4Q9NQC3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC21.94■■□□□ 1.1
RTN4Q9NQC3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTN4Q9NQC3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RTN4Q9NQC3 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
RTN4Q9NQC3 PGM5P4-201ENST00000421970 445 ntBASIC21.94■■□□□ 1.1
RTN4Q9NQC3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.94■■□□□ 1.1
RTN4Q9NQC3 MYCNOS-205ENST00000641950 531 ntBASIC21.94■■□□□ 1.1
RTN4Q9NQC3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
RTN4Q9NQC3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.94■■□□□ 1.1
RTN4Q9NQC3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTN4Q9NQC3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
RTN4Q9NQC3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms