Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 AC133681.1-201ENST00000465482 601 ntBASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 AC026366.1-201ENST00000488803 879 ntBASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 CKBP1-201ENST00000565489 1086 ntBASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 AL109659.2-201ENST00000606809 1674 ntBASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 FLJ13224-201ENST00000313737 1514 ntBASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SLC52A3Q9NQ40 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SLC52A3Q9NQ40 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC52A3Q9NQ40 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC52A3Q9NQ40 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC52A3Q9NQ40 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC52A3Q9NQ40 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC52A3Q9NQ40 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC52A3Q9NQ40 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC52A3Q9NQ40 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC52A3Q9NQ40 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SLC52A3Q9NQ40 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC52A3Q9NQ40 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.66■□□□□ 0.42
SLC52A3Q9NQ40 RPS2P4-201ENST00000476944 856 ntBASIC17.66■□□□□ 0.42
SLC52A3Q9NQ40 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC52A3Q9NQ40 AC124016.1-201ENST00000609552 612 ntBASIC17.66■□□□□ 0.42
SLC52A3Q9NQ40 AL353708.3-201ENST00000610272 989 ntBASIC17.66■□□□□ 0.42
SLC52A3Q9NQ40 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC52A3Q9NQ40 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SLC52A3Q9NQ40 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC52A3Q9NQ40 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC52A3Q9NQ40 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC52A3Q9NQ40 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SLC52A3Q9NQ40 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC52A3Q9NQ40 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC52A3Q9NQ40 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC52A3Q9NQ40 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC52A3Q9NQ40 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC52A3Q9NQ40 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC52A3Q9NQ40 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC52A3Q9NQ40 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC52A3Q9NQ40 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC52A3Q9NQ40 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SLC52A3Q9NQ40 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC52A3Q9NQ40 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC52A3Q9NQ40 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.65■□□□□ 0.42
SLC52A3Q9NQ40 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC52A3Q9NQ40 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC52A3Q9NQ40 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC52A3Q9NQ40 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC52A3Q9NQ40 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC52A3Q9NQ40 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC52A3Q9NQ40 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC52A3Q9NQ40 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC52A3Q9NQ40 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC52A3Q9NQ40 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC52A3Q9NQ40 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.64■□□□□ 0.42
SLC52A3Q9NQ40 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SLC52A3Q9NQ40 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SLC52A3Q9NQ40 AC139713.2-201ENST00000641328 2723 ntBASIC17.64■□□□□ 0.42
SLC52A3Q9NQ40 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC52A3Q9NQ40 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC52A3Q9NQ40 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.64■□□□□ 0.41
SLC52A3Q9NQ40 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC52A3Q9NQ40 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC52A3Q9NQ40 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC52A3Q9NQ40 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC52A3Q9NQ40 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC52A3Q9NQ40 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC52A3Q9NQ40 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.64■□□□□ 0.41
SLC52A3Q9NQ40 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC52A3Q9NQ40 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.64■□□□□ 0.41
SLC52A3Q9NQ40 AC239809.2-201ENST00000415381 517 ntBASIC17.64■□□□□ 0.41
SLC52A3Q9NQ40 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC52A3Q9NQ40 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC52A3Q9NQ40 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
SLC52A3Q9NQ40 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC52A3Q9NQ40 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SLC52A3Q9NQ40 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC52A3Q9NQ40 AC008622.2-201ENST00000617006 1229 ntBASIC17.64■□□□□ 0.41
SLC52A3Q9NQ40 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC52A3Q9NQ40 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC52A3Q9NQ40 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms