Protein–RNA interactions for Protein: Q9HC58

SLC24A3, Sodium/potassium/calcium exchanger 3, humanhuman

Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC24A3Q9HC58 AL136379.1-201ENST00000623471 2642 ntBASIC18.19■□□□□ 0.5
SLC24A3Q9HC58 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 FAM197Y4-202ENST00000622692 608 ntBASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 HYMAI-201ENST00000635591 3347 ntBASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 LINC01126-201ENST00000623515 1646 ntBASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC24A3Q9HC58 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SLC24A3Q9HC58 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC24A3Q9HC58 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC24A3Q9HC58 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC24A3Q9HC58 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC24A3Q9HC58 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC24A3Q9HC58 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC24A3Q9HC58 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
SLC24A3Q9HC58 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC24A3Q9HC58 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC24A3Q9HC58 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC24A3Q9HC58 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SLC24A3Q9HC58 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC24A3Q9HC58 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC24A3Q9HC58 CYP2T3P-201ENST00000601990 817 ntBASIC18.16■□□□□ 0.5
SLC24A3Q9HC58 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC24A3Q9HC58 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC24A3Q9HC58 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC24A3Q9HC58 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SLC24A3Q9HC58 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC24A3Q9HC58 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC24A3Q9HC58 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SLC24A3Q9HC58 LINC00896-202ENST00000609602 2128 ntBASIC18.16■□□□□ 0.5
SLC24A3Q9HC58 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SLC24A3Q9HC58 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC24A3Q9HC58 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC24A3Q9HC58 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms