Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.84■□□□□ 0.45
BRF2Q9HAW0 AC034236.2-201ENST00000606662 1610 ntBASIC17.83■□□□□ 0.45
BRF2Q9HAW0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
BRF2Q9HAW0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
BRF2Q9HAW0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BRF2Q9HAW0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
BRF2Q9HAW0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.83■□□□□ 0.45
BRF2Q9HAW0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.83■□□□□ 0.45
BRF2Q9HAW0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.83■□□□□ 0.45
BRF2Q9HAW0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.83■□□□□ 0.45
BRF2Q9HAW0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BRF2Q9HAW0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
BRF2Q9HAW0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
BRF2Q9HAW0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.83■□□□□ 0.44
BRF2Q9HAW0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRF2Q9HAW0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRF2Q9HAW0 SLC25A1P2-201ENST00000430693 912 ntBASIC17.83■□□□□ 0.44
BRF2Q9HAW0 RBM17P1-201ENST00000453646 1190 ntBASIC17.83■□□□□ 0.44
BRF2Q9HAW0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.83■□□□□ 0.44
BRF2Q9HAW0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.83■□□□□ 0.44
BRF2Q9HAW0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.83■□□□□ 0.44
BRF2Q9HAW0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.83■□□□□ 0.44
BRF2Q9HAW0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRF2Q9HAW0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.83■□□□□ 0.44
BRF2Q9HAW0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.83■□□□□ 0.44
BRF2Q9HAW0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRF2Q9HAW0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRF2Q9HAW0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.82■□□□□ 0.44
BRF2Q9HAW0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
BRF2Q9HAW0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRF2Q9HAW0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BRF2Q9HAW0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BRF2Q9HAW0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRF2Q9HAW0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.82■□□□□ 0.44
BRF2Q9HAW0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.82■□□□□ 0.44
BRF2Q9HAW0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.82■□□□□ 0.44
BRF2Q9HAW0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BRF2Q9HAW0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
BRF2Q9HAW0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
BRF2Q9HAW0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
BRF2Q9HAW0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRF2Q9HAW0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRF2Q9HAW0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BRF2Q9HAW0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.82■□□□□ 0.44
BRF2Q9HAW0 MIR3180-5-201ENST00000583743 153 ntBASIC17.82■□□□□ 0.44
BRF2Q9HAW0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRF2Q9HAW0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.82■□□□□ 0.44
BRF2Q9HAW0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.82■□□□□ 0.44
BRF2Q9HAW0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.82■□□□□ 0.44
BRF2Q9HAW0 AL023803.3-201ENST00000615559 522 ntBASIC17.82■□□□□ 0.44
BRF2Q9HAW0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.82■□□□□ 0.44
BRF2Q9HAW0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRF2Q9HAW0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRF2Q9HAW0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 ABALON-201ENST00000629058 1903 ntBASIC17.81■□□□□ 0.44
BRF2Q9HAW0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 TSPY17P-201ENST00000450329 467 ntBASIC17.81■□□□□ 0.44
BRF2Q9HAW0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
BRF2Q9HAW0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
BRF2Q9HAW0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRF2Q9HAW0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.8■□□□□ 0.44
BRF2Q9HAW0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRF2Q9HAW0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.8■□□□□ 0.44
BRF2Q9HAW0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
BRF2Q9HAW0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRF2Q9HAW0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRF2Q9HAW0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
BRF2Q9HAW0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRF2Q9HAW0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms