Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC23.52■■□□□ 1.36
CHMP4BQ9H444 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
CHMP4BQ9H444 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.35
CHMP4BQ9H444 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHMP4BQ9H444 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CHMP4BQ9H444 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHMP4BQ9H444 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC23.51■■□□□ 1.35
CHMP4BQ9H444 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHMP4BQ9H444 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CHMP4BQ9H444 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHMP4BQ9H444 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHMP4BQ9H444 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHMP4BQ9H444 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC23.51■■□□□ 1.35
CHMP4BQ9H444 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC23.51■■□□□ 1.35
CHMP4BQ9H444 BX088651.1-201ENST00000540551 451 ntBASIC23.51■■□□□ 1.35
CHMP4BQ9H444 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CHMP4BQ9H444 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC23.51■■□□□ 1.35
CHMP4BQ9H444 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC23.51■■□□□ 1.35
CHMP4BQ9H444 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC23.51■■□□□ 1.35
CHMP4BQ9H444 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHMP4BQ9H444 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CHMP4BQ9H444 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHMP4BQ9H444 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CHMP4BQ9H444 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC23.51■■□□□ 1.35
CHMP4BQ9H444 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
CHMP4BQ9H444 MYLKP1-201ENST00000509077 1580 ntBASIC23.51■■□□□ 1.35
CHMP4BQ9H444 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHMP4BQ9H444 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHMP4BQ9H444 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHMP4BQ9H444 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
CHMP4BQ9H444 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 KRT8P7-201ENST00000533003 1432 ntBASIC23.5■■□□□ 1.35
CHMP4BQ9H444 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 EFTUD1P1-204ENST00000560401 1798 ntBASIC23.5■■□□□ 1.35
CHMP4BQ9H444 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 PHB2-202ENST00000440277 996 ntTSL 5 BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 AP000525.1-201ENST00000608286 694 ntBASIC23.5■■□□□ 1.35
CHMP4BQ9H444 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 AC009113.1-201ENST00000570267 2443 ntBASIC23.5■■□□□ 1.35
CHMP4BQ9H444 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC23.5■■□□□ 1.35
CHMP4BQ9H444 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
CHMP4BQ9H444 AC020763.4-201ENST00000623414 4170 ntBASIC23.49■■□□□ 1.35
CHMP4BQ9H444 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHMP4BQ9H444 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CHMP4BQ9H444 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHMP4BQ9H444 HIST1H2APS4-201ENST00000362070 348 ntBASIC23.49■■□□□ 1.35
CHMP4BQ9H444 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHMP4BQ9H444 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC23.49■■□□□ 1.35
CHMP4BQ9H444 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC23.49■■□□□ 1.35
CHMP4BQ9H444 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC23.49■■□□□ 1.35
CHMP4BQ9H444 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
CHMP4BQ9H444 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC23.49■■□□□ 1.35
CHMP4BQ9H444 AC126763.1-201ENST00000552015 2118 ntBASIC23.49■■□□□ 1.35
CHMP4BQ9H444 CFL2-205ENST00000555765 632 ntTSL 2 BASIC23.49■■□□□ 1.35
CHMP4BQ9H444 AC010653.2-201ENST00000623505 997 ntBASIC23.49■■□□□ 1.35
CHMP4BQ9H444 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC23.49■■□□□ 1.35
CHMP4BQ9H444 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC23.49■■□□□ 1.35
CHMP4BQ9H444 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHMP4BQ9H444 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC23.49■■□□□ 1.35
CHMP4BQ9H444 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHMP4BQ9H444 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC23.49■■□□□ 1.35
CHMP4BQ9H444 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHMP4BQ9H444 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHMP4BQ9H444 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC23.48■■□□□ 1.35
CHMP4BQ9H444 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
CHMP4BQ9H444 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CHMP4BQ9H444 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHMP4BQ9H444 MIR1238-201ENST00000408483 83 ntBASIC23.48■■□□□ 1.35
CHMP4BQ9H444 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC23.48■■□□□ 1.35
CHMP4BQ9H444 ELP6-205ENST00000439305 880 ntTSL 2 BASIC23.48■■□□□ 1.35
CHMP4BQ9H444 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC23.48■■□□□ 1.35
CHMP4BQ9H444 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC23.48■■□□□ 1.35
CHMP4BQ9H444 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHMP4BQ9H444 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHMP4BQ9H444 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC23.48■■□□□ 1.35
CHMP4BQ9H444 AC092338.2-201ENST00000568827 1415 ntBASIC23.48■■□□□ 1.35
CHMP4BQ9H444 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms