Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RSPO3Q9BXY4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RSPO3Q9BXY4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RSPO3Q9BXY4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RSPO3Q9BXY4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.15■□□□□ 0.34
RSPO3Q9BXY4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 ABHD17AP1-201ENST00000358206 933 ntBASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 MFAP1P1-201ENST00000442257 1255 ntBASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 AC233702.5-201ENST00000584107 538 ntBASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.14■□□□□ 0.33
RSPO3Q9BXY4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 AL158047.1-201ENST00000445918 881 ntBASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 KRT8P50-201ENST00000562022 1438 ntBASIC17.13■□□□□ 0.33
RSPO3Q9BXY4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 AP000997.3-201ENST00000623333 2250 ntBASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 SLC25A1P4-201ENST00000567977 778 ntBASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 AL049637.2-201ENST00000641778 930 ntBASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RSPO3Q9BXY4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms