Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.33■□□□□ 0.52
CCM2Q9BSQ5 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.33■□□□□ 0.52
CCM2Q9BSQ5 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.33■□□□□ 0.52
CCM2Q9BSQ5 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCM2Q9BSQ5 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCM2Q9BSQ5 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCM2Q9BSQ5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.33■□□□□ 0.52
CCM2Q9BSQ5 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCM2Q9BSQ5 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCM2Q9BSQ5 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCM2Q9BSQ5 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCM2Q9BSQ5 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.33■□□□□ 0.52
CCM2Q9BSQ5 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCM2Q9BSQ5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 AC093503.3-201ENST00000624917 2352 ntBASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 TMPOP1-202ENST00000424642 1267 ntBASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 KRT8P7-201ENST00000533003 1432 ntBASIC18.32■□□□□ 0.52
CCM2Q9BSQ5 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 KRT18P57-201ENST00000443599 1254 ntBASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 COX11P1-201ENST00000489116 835 ntBASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCM2Q9BSQ5 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.3■□□□□ 0.52
CCM2Q9BSQ5 KRT18P23-201ENST00000435622 1283 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms