Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PAAF1Q9BRP4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PAAF1Q9BRP4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.87■□□□□ 0.77
PAAF1Q9BRP4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PAAF1Q9BRP4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
PAAF1Q9BRP4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PAAF1Q9BRP4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
PAAF1Q9BRP4 AL450487.1-201ENST00000426799 995 ntBASIC19.87■□□□□ 0.77
PAAF1Q9BRP4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.87■□□□□ 0.77
PAAF1Q9BRP4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PAAF1Q9BRP4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PAAF1Q9BRP4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.87■□□□□ 0.77
PAAF1Q9BRP4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PAAF1Q9BRP4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.87■□□□□ 0.77
PAAF1Q9BRP4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PAAF1Q9BRP4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PAAF1Q9BRP4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.87■□□□□ 0.77
PAAF1Q9BRP4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.87■□□□□ 0.77
PAAF1Q9BRP4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PAAF1Q9BRP4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
PAAF1Q9BRP4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PAAF1Q9BRP4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PAAF1Q9BRP4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PAAF1Q9BRP4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PAAF1Q9BRP4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PAAF1Q9BRP4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.86■□□□□ 0.77
PAAF1Q9BRP4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PAAF1Q9BRP4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PAAF1Q9BRP4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PAAF1Q9BRP4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PAAF1Q9BRP4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PAAF1Q9BRP4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.86■□□□□ 0.77
PAAF1Q9BRP4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
PAAF1Q9BRP4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.86■□□□□ 0.77
PAAF1Q9BRP4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.86■□□□□ 0.77
PAAF1Q9BRP4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.86■□□□□ 0.77
PAAF1Q9BRP4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PAAF1Q9BRP4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.86■□□□□ 0.77
PAAF1Q9BRP4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.86■□□□□ 0.77
PAAF1Q9BRP4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.86■□□□□ 0.77
PAAF1Q9BRP4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PAAF1Q9BRP4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PAAF1Q9BRP4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.85■□□□□ 0.77
PAAF1Q9BRP4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.85■□□□□ 0.77
PAAF1Q9BRP4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PAAF1Q9BRP4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PAAF1Q9BRP4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PAAF1Q9BRP4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.85■□□□□ 0.77
PAAF1Q9BRP4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PAAF1Q9BRP4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PAAF1Q9BRP4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.85■□□□□ 0.77
PAAF1Q9BRP4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PAAF1Q9BRP4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PAAF1Q9BRP4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.85■□□□□ 0.77
PAAF1Q9BRP4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
PAAF1Q9BRP4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PAAF1Q9BRP4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PAAF1Q9BRP4 SLC25A24-204ENST00000569674 2357 ntBASIC19.85■□□□□ 0.77
PAAF1Q9BRP4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PAAF1Q9BRP4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PAAF1Q9BRP4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.85■□□□□ 0.77
PAAF1Q9BRP4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 CHCHD2P8-201ENST00000429873 447 ntBASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 MIR3180-4-201ENST00000582223 153 ntBASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 AC005332.3-201ENST00000589904 676 ntBASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PAAF1Q9BRP4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
PAAF1Q9BRP4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.83■□□□□ 0.77
PAAF1Q9BRP4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PAAF1Q9BRP4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms