Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VRK1Q99986 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
VRK1Q99986 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VRK1Q99986 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VRK1Q99986 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VRK1Q99986 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VRK1Q99986 AL137013.1-201ENST00000432946 1228 ntBASIC16.46■□□□□ 0.23
VRK1Q99986 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.46■□□□□ 0.23
VRK1Q99986 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
VRK1Q99986 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.46■□□□□ 0.23
VRK1Q99986 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.46■□□□□ 0.23
VRK1Q99986 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VRK1Q99986 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.46■□□□□ 0.23
VRK1Q99986 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
VRK1Q99986 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.46■□□□□ 0.23
VRK1Q99986 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VRK1Q99986 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VRK1Q99986 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VRK1Q99986 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VRK1Q99986 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
VRK1Q99986 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
VRK1Q99986 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VRK1Q99986 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
VRK1Q99986 AC104581.1-202ENST00000635932 2618 ntBASIC16.46■□□□□ 0.22
VRK1Q99986 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
VRK1Q99986 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
VRK1Q99986 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
VRK1Q99986 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VRK1Q99986 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.45■□□□□ 0.22
VRK1Q99986 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.45■□□□□ 0.22
VRK1Q99986 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VRK1Q99986 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VRK1Q99986 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.45■□□□□ 0.22
VRK1Q99986 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.45■□□□□ 0.22
VRK1Q99986 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VRK1Q99986 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.45■□□□□ 0.22
VRK1Q99986 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VRK1Q99986 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.45■□□□□ 0.22
VRK1Q99986 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VRK1Q99986 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VRK1Q99986 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.45■□□□□ 0.22
VRK1Q99986 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VRK1Q99986 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
VRK1Q99986 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
VRK1Q99986 AC005521.1-201ENST00000393351 872 ntBASIC16.45■□□□□ 0.22
VRK1Q99986 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.45■□□□□ 0.22
VRK1Q99986 LIN28AP1-201ENST00000429574 405 ntBASIC16.45■□□□□ 0.22
VRK1Q99986 AC128688.1-201ENST00000487626 519 ntBASIC16.45■□□□□ 0.22
VRK1Q99986 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VRK1Q99986 AP005242.2-201ENST00000580065 1175 ntBASIC16.45■□□□□ 0.22
VRK1Q99986 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
VRK1Q99986 AP000692.2-201ENST00000608391 879 ntBASIC16.45■□□□□ 0.22
VRK1Q99986 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VRK1Q99986 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.45■□□□□ 0.22
VRK1Q99986 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.45■□□□□ 0.22
VRK1Q99986 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VRK1Q99986 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VRK1Q99986 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VRK1Q99986 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VRK1Q99986 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VRK1Q99986 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.45■□□□□ 0.22
VRK1Q99986 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VRK1Q99986 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
VRK1Q99986 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
VRK1Q99986 AL032819.2-201ENST00000624543 2162 ntBASIC16.44■□□□□ 0.22
VRK1Q99986 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
VRK1Q99986 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VRK1Q99986 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VRK1Q99986 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VRK1Q99986 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VRK1Q99986 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VRK1Q99986 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VRK1Q99986 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
VRK1Q99986 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.44■□□□□ 0.22
VRK1Q99986 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.44■□□□□ 0.22
VRK1Q99986 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.44■□□□□ 0.22
VRK1Q99986 ATP5G1P1-201ENST00000448724 379 ntBASIC16.44■□□□□ 0.22
VRK1Q99986 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.44■□□□□ 0.22
VRK1Q99986 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.44■□□□□ 0.22
VRK1Q99986 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
VRK1Q99986 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.44■□□□□ 0.22
VRK1Q99986 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VRK1Q99986 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
VRK1Q99986 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.44■□□□□ 0.22
VRK1Q99986 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VRK1Q99986 AC106820.2-201ENST00000563775 3264 ntBASIC16.44■□□□□ 0.22
VRK1Q99986 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VRK1Q99986 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
VRK1Q99986 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VRK1Q99986 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VRK1Q99986 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VRK1Q99986 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VRK1Q99986 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK1Q99986 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VRK1Q99986 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
VRK1Q99986 AL133373.2-201ENST00000623187 2828 ntBASIC16.43■□□□□ 0.22
VRK1Q99986 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK1Q99986 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK1Q99986 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.43■□□□□ 0.22
VRK1Q99986 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms