Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 WWOX-216ENST00000569818 525 ntBASIC18.13■□□□□ 0.49
PKP4Q99569 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PKP4Q99569 AC012306.2-201ENST00000609350 630 ntBASIC18.13■□□□□ 0.49
PKP4Q99569 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PKP4Q99569 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.13■□□□□ 0.49
PKP4Q99569 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PKP4Q99569 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PKP4Q99569 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.13■□□□□ 0.49
PKP4Q99569 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PKP4Q99569 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
PKP4Q99569 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PKP4Q99569 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PKP4Q99569 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.13■□□□□ 0.49
PKP4Q99569 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PKP4Q99569 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PKP4Q99569 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PKP4Q99569 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PKP4Q99569 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PKP4Q99569 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PKP4Q99569 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.12■□□□□ 0.49
PKP4Q99569 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.12■□□□□ 0.49
PKP4Q99569 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.12■□□□□ 0.49
PKP4Q99569 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PKP4Q99569 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.12■□□□□ 0.49
PKP4Q99569 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.12■□□□□ 0.49
PKP4Q99569 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PKP4Q99569 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PKP4Q99569 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PKP4Q99569 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PKP4Q99569 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PKP4Q99569 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PKP4Q99569 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PKP4Q99569 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PKP4Q99569 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PKP4Q99569 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.12■□□□□ 0.49
PKP4Q99569 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
PKP4Q99569 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.12■□□□□ 0.49
PKP4Q99569 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PKP4Q99569 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.12■□□□□ 0.49
PKP4Q99569 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.12■□□□□ 0.49
PKP4Q99569 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.12■□□□□ 0.49
PKP4Q99569 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.12■□□□□ 0.49
PKP4Q99569 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PKP4Q99569 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.12■□□□□ 0.49
PKP4Q99569 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.12■□□□□ 0.49
PKP4Q99569 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PKP4Q99569 AC097493.4-201ENST00000641197 219 ntBASIC18.12■□□□□ 0.49
PKP4Q99569 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PKP4Q99569 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PKP4Q99569 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PKP4Q99569 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PKP4Q99569 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.12■□□□□ 0.49
PKP4Q99569 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.12■□□□□ 0.49
PKP4Q99569 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PKP4Q99569 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PKP4Q99569 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PKP4Q99569 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.12■□□□□ 0.49
PKP4Q99569 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP4Q99569 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PKP4Q99569 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.11■□□□□ 0.49
PKP4Q99569 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP4Q99569 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP4Q99569 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PKP4Q99569 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.11■□□□□ 0.49
PKP4Q99569 AC211429.1-201ENST00000415277 523 ntBASIC18.11■□□□□ 0.49
PKP4Q99569 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PKP4Q99569 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.11■□□□□ 0.49
PKP4Q99569 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.11■□□□□ 0.49
PKP4Q99569 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.11■□□□□ 0.49
PKP4Q99569 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PKP4Q99569 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.11■□□□□ 0.49
PKP4Q99569 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PKP4Q99569 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PKP4Q99569 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP4Q99569 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PKP4Q99569 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PKP4Q99569 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PKP4Q99569 AC034236.2-201ENST00000606662 1610 ntBASIC18.11■□□□□ 0.49
PKP4Q99569 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP4Q99569 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PKP4Q99569 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.11■□□□□ 0.49
PKP4Q99569 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PKP4Q99569 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP4Q99569 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP4Q99569 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP4Q99569 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.11■□□□□ 0.49
PKP4Q99569 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PKP4Q99569 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PKP4Q99569 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PKP4Q99569 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PKP4Q99569 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PKP4Q99569 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
PKP4Q99569 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PKP4Q99569 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.1■□□□□ 0.49
PKP4Q99569 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.1■□□□□ 0.49
PKP4Q99569 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PKP4Q99569 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PKP4Q99569 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.1■□□□□ 0.49
PKP4Q99569 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
PKP4Q99569 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms