Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AC233263.1-201ENST00000578059 224 ntBASIC19.73■□□□□ 0.75
CALR3Q96L12 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.73■□□□□ 0.75
CALR3Q96L12 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CALR3Q96L12 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CALR3Q96L12 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CALR3Q96L12 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.73■□□□□ 0.75
CALR3Q96L12 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CALR3Q96L12 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
CALR3Q96L12 HTR7P1-201ENST00000538670 1336 ntBASIC19.73■□□□□ 0.75
CALR3Q96L12 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CALR3Q96L12 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.73■□□□□ 0.75
CALR3Q96L12 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.73■□□□□ 0.75
CALR3Q96L12 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CALR3Q96L12 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CALR3Q96L12 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CALR3Q96L12 AC008764.6-201ENST00000595909 2069 ntBASIC19.72■□□□□ 0.75
CALR3Q96L12 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CALR3Q96L12 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.72■□□□□ 0.75
CALR3Q96L12 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CALR3Q96L12 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CALR3Q96L12 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CALR3Q96L12 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CALR3Q96L12 KRT16P1-201ENST00000399124 1418 ntBASIC19.72■□□□□ 0.75
CALR3Q96L12 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.72■□□□□ 0.75
CALR3Q96L12 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.72■□□□□ 0.75
CALR3Q96L12 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.72■□□□□ 0.75
CALR3Q96L12 AL031985.4-201ENST00000642138 673 ntBASIC19.72■□□□□ 0.75
CALR3Q96L12 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CALR3Q96L12 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CALR3Q96L12 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CALR3Q96L12 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CALR3Q96L12 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CALR3Q96L12 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CALR3Q96L12 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CALR3Q96L12 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.72■□□□□ 0.75
CALR3Q96L12 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CALR3Q96L12 AL109659.2-201ENST00000606809 1674 ntBASIC19.71■□□□□ 0.75
CALR3Q96L12 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CALR3Q96L12 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CALR3Q96L12 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CALR3Q96L12 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.71■□□□□ 0.75
CALR3Q96L12 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CALR3Q96L12 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.71■□□□□ 0.75
CALR3Q96L12 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CALR3Q96L12 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CALR3Q96L12 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CALR3Q96L12 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CALR3Q96L12 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.71■□□□□ 0.75
CALR3Q96L12 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CALR3Q96L12 AP000593.1-201ENST00000393668 712 ntBASIC19.71■□□□□ 0.75
CALR3Q96L12 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.71■□□□□ 0.75
CALR3Q96L12 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CALR3Q96L12 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CALR3Q96L12 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.71■□□□□ 0.75
CALR3Q96L12 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.71■□□□□ 0.75
CALR3Q96L12 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.71■□□□□ 0.75
CALR3Q96L12 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.71■□□□□ 0.75
CALR3Q96L12 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.71■□□□□ 0.75
CALR3Q96L12 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CALR3Q96L12 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.71■□□□□ 0.75
CALR3Q96L12 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CALR3Q96L12 AC092666.2-201ENST00000613287 246 ntBASIC19.71■□□□□ 0.75
CALR3Q96L12 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.71■□□□□ 0.75
CALR3Q96L12 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CALR3Q96L12 AC067852.2-201ENST00000590513 2313 ntBASIC19.71■□□□□ 0.75
CALR3Q96L12 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CALR3Q96L12 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CALR3Q96L12 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CALR3Q96L12 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CALR3Q96L12 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.71■□□□□ 0.75
CALR3Q96L12 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CALR3Q96L12 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CALR3Q96L12 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CALR3Q96L12 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.71■□□□□ 0.75
CALR3Q96L12 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CALR3Q96L12 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CALR3Q96L12 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CALR3Q96L12 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
CALR3Q96L12 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CALR3Q96L12 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CALR3Q96L12 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CALR3Q96L12 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CALR3Q96L12 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CALR3Q96L12 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CALR3Q96L12 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CALR3Q96L12 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CALR3Q96L12 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CALR3Q96L12 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CALR3Q96L12 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CALR3Q96L12 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CALR3Q96L12 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CALR3Q96L12 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CALR3Q96L12 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CALR3Q96L12 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
CALR3Q96L12 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CALR3Q96L12 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CALR3Q96L12 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CALR3Q96L12 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.7■□□□□ 0.74
CALR3Q96L12 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CALR3Q96L12 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms