Protein–RNA interactions for Protein: Q96FW1

OTUB1, Ubiquitin thioesterase OTUB1, humanhuman

Predicted RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1Q96FW1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
OTUB1Q96FW1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.68■□□□□ 0.42
OTUB1Q96FW1 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
OTUB1Q96FW1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
OTUB1Q96FW1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
OTUB1Q96FW1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
OTUB1Q96FW1 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.68■□□□□ 0.42
OTUB1Q96FW1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
OTUB1Q96FW1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.68■□□□□ 0.42
OTUB1Q96FW1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.68■□□□□ 0.42
OTUB1Q96FW1 AC011298.2-201ENST00000617989 482 ntBASIC17.68■□□□□ 0.42
OTUB1Q96FW1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.68■□□□□ 0.42
OTUB1Q96FW1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
OTUB1Q96FW1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
OTUB1Q96FW1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.68■□□□□ 0.42
OTUB1Q96FW1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
OTUB1Q96FW1 WIZP1-201ENST00000531444 2299 ntBASIC17.68■□□□□ 0.42
OTUB1Q96FW1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.68■□□□□ 0.42
OTUB1Q96FW1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
OTUB1Q96FW1 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
OTUB1Q96FW1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 AL031598.1-201ENST00000561511 1773 ntBASIC17.67■□□□□ 0.42
OTUB1Q96FW1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 AC004951.3-201ENST00000418645 1148 ntBASIC17.67■□□□□ 0.42
OTUB1Q96FW1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 AC011506.1-201ENST00000474329 610 ntBASIC17.67■□□□□ 0.42
OTUB1Q96FW1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 AC073195.1-201ENST00000607241 877 ntBASIC17.67■□□□□ 0.42
OTUB1Q96FW1 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 AL138781.2-201ENST00000617896 1843 ntBASIC17.67■□□□□ 0.42
OTUB1Q96FW1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 AC009113.1-201ENST00000570267 2443 ntBASIC17.67■□□□□ 0.42
OTUB1Q96FW1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
OTUB1Q96FW1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
OTUB1Q96FW1 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
OTUB1Q96FW1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OTUB1Q96FW1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.66■□□□□ 0.42
OTUB1Q96FW1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OTUB1Q96FW1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
OTUB1Q96FW1 AC007613.1-201ENST00000572811 2597 ntBASIC17.66■□□□□ 0.42
OTUB1Q96FW1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
OTUB1Q96FW1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
OTUB1Q96FW1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.66■□□□□ 0.42
OTUB1Q96FW1 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
OTUB1Q96FW1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
OTUB1Q96FW1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
OTUB1Q96FW1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
OTUB1Q96FW1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.66■□□□□ 0.42
OTUB1Q96FW1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.66■□□□□ 0.42
OTUB1Q96FW1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.66■□□□□ 0.42
OTUB1Q96FW1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.66■□□□□ 0.42
OTUB1Q96FW1 AL031985.4-201ENST00000642138 673 ntBASIC17.66■□□□□ 0.42
OTUB1Q96FW1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
OTUB1Q96FW1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.66■□□□□ 0.42
OTUB1Q96FW1 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
OTUB1Q96FW1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
OTUB1Q96FW1 CROCCP1-201ENST00000426910 5675 ntBASIC17.66■□□□□ 0.42
OTUB1Q96FW1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OTUB1Q96FW1 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
OTUB1Q96FW1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OTUB1Q96FW1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OTUB1Q96FW1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
OTUB1Q96FW1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
OTUB1Q96FW1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
OTUB1Q96FW1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.65■□□□□ 0.42
OTUB1Q96FW1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.65■□□□□ 0.42
OTUB1Q96FW1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.65■□□□□ 0.42
OTUB1Q96FW1 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
OTUB1Q96FW1 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
OTUB1Q96FW1 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
OTUB1Q96FW1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.65■□□□□ 0.42
OTUB1Q96FW1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
OTUB1Q96FW1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OTUB1Q96FW1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms