Protein–RNA interactions for Protein: Q96A83

COL26A1, Collagen alpha-1(XXVI) chain, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL26A1Q96A83 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL26A1Q96A83 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
COL26A1Q96A83 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.01■□□□□ 0.47
COL26A1Q96A83 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.01■□□□□ 0.47
COL26A1Q96A83 HMGA1P5-201ENST00000412453 271 ntBASIC18.01■□□□□ 0.47
COL26A1Q96A83 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL26A1Q96A83 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
COL26A1Q96A83 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
COL26A1Q96A83 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.01■□□□□ 0.47
COL26A1Q96A83 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.01■□□□□ 0.47
COL26A1Q96A83 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.01■□□□□ 0.47
COL26A1Q96A83 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
COL26A1Q96A83 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.01■□□□□ 0.47
COL26A1Q96A83 FAM87A-204ENST00000613235 858 ntBASIC18.01■□□□□ 0.47
COL26A1Q96A83 AC010653.2-201ENST00000623505 997 ntBASIC18.01■□□□□ 0.47
COL26A1Q96A83 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
COL26A1Q96A83 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
COL26A1Q96A83 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.01■□□□□ 0.47
COL26A1Q96A83 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL26A1Q96A83 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL26A1Q96A83 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL26A1Q96A83 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.01■□□□□ 0.47
COL26A1Q96A83 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL26A1Q96A83 AP000974.1-201ENST00000623909 2387 ntBASIC18.01■□□□□ 0.47
COL26A1Q96A83 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL26A1Q96A83 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL26A1Q96A83 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
COL26A1Q96A83 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL26A1Q96A83 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
COL26A1Q96A83 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
COL26A1Q96A83 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
COL26A1Q96A83 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
COL26A1Q96A83 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL26A1Q96A83 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL26A1Q96A83 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL26A1Q96A83 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
COL26A1Q96A83 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18■□□□□ 0.47
COL26A1Q96A83 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL26A1Q96A83 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18■□□□□ 0.47
COL26A1Q96A83 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL26A1Q96A83 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18■□□□□ 0.47
COL26A1Q96A83 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL26A1Q96A83 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL26A1Q96A83 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL26A1Q96A83 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18■□□□□ 0.47
COL26A1Q96A83 AC010203.1-204ENST00000548782 407 ntBASIC18■□□□□ 0.47
COL26A1Q96A83 AL023803.3-201ENST00000615559 522 ntBASIC18■□□□□ 0.47
COL26A1Q96A83 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18■□□□□ 0.47
COL26A1Q96A83 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18■□□□□ 0.47
COL26A1Q96A83 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
COL26A1Q96A83 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18■□□□□ 0.47
COL26A1Q96A83 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
COL26A1Q96A83 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL26A1Q96A83 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
COL26A1Q96A83 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL26A1Q96A83 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL26A1Q96A83 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL26A1Q96A83 AC092338.2-201ENST00000568827 1415 ntBASIC17.99■□□□□ 0.47
COL26A1Q96A83 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL26A1Q96A83 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL26A1Q96A83 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL26A1Q96A83 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL26A1Q96A83 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.99■□□□□ 0.47
COL26A1Q96A83 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.99■□□□□ 0.47
COL26A1Q96A83 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL26A1Q96A83 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL26A1Q96A83 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
COL26A1Q96A83 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.99■□□□□ 0.47
COL26A1Q96A83 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.99■□□□□ 0.47
COL26A1Q96A83 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.99■□□□□ 0.47
COL26A1Q96A83 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.99■□□□□ 0.47
COL26A1Q96A83 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
COL26A1Q96A83 MIR3197-201ENST00000582241 73 ntBASIC17.99■□□□□ 0.47
COL26A1Q96A83 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.99■□□□□ 0.47
COL26A1Q96A83 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL26A1Q96A83 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL26A1Q96A83 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL26A1Q96A83 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL26A1Q96A83 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL26A1Q96A83 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
COL26A1Q96A83 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL26A1Q96A83 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.99■□□□□ 0.47
COL26A1Q96A83 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL26A1Q96A83 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
COL26A1Q96A83 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.99■□□□□ 0.47
COL26A1Q96A83 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL26A1Q96A83 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.98■□□□□ 0.47
COL26A1Q96A83 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL26A1Q96A83 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL26A1Q96A83 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL26A1Q96A83 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL26A1Q96A83 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
COL26A1Q96A83 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.98■□□□□ 0.47
COL26A1Q96A83 AC004870.1-201ENST00000315132 882 ntBASIC17.98■□□□□ 0.47
COL26A1Q96A83 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL26A1Q96A83 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL26A1Q96A83 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL26A1Q96A83 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL26A1Q96A83 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.98■□□□□ 0.47
COL26A1Q96A83 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms