Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRPM4Q8TD43 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRPM4Q8TD43 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRPM4Q8TD43 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRPM4Q8TD43 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRPM4Q8TD43 GGCT-205ENST00000409436 954 ntTSL 3 BASIC22.03■■□□□ 1.12
TRPM4Q8TD43 SCARNA2-201ENST00000458748 420 ntBASIC22.03■■□□□ 1.12
TRPM4Q8TD43 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRPM4Q8TD43 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC22.03■■□□□ 1.12
TRPM4Q8TD43 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRPM4Q8TD43 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC22.03■■□□□ 1.12
TRPM4Q8TD43 PAM16-208ENST00000573553 722 ntTSL 2 BASIC22.03■■□□□ 1.12
TRPM4Q8TD43 AC005336.2-201ENST00000593183 939 ntBASIC22.03■■□□□ 1.12
TRPM4Q8TD43 MTDHP3-201ENST00000594186 672 ntBASIC22.03■■□□□ 1.12
TRPM4Q8TD43 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
TRPM4Q8TD43 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRPM4Q8TD43 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC22.03■■□□□ 1.12
TRPM4Q8TD43 LINC01521-201ENST00000504184 1943 ntBASIC22.03■■□□□ 1.12
TRPM4Q8TD43 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRPM4Q8TD43 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRPM4Q8TD43 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRPM4Q8TD43 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRPM4Q8TD43 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRPM4Q8TD43 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.02■■□□□ 1.12
TRPM4Q8TD43 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
TRPM4Q8TD43 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRPM4Q8TD43 MED16-201ENST00000269814 1199 ntTSL 5 BASIC22.02■■□□□ 1.12
TRPM4Q8TD43 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC22.02■■□□□ 1.12
TRPM4Q8TD43 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC22.02■■□□□ 1.12
TRPM4Q8TD43 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
TRPM4Q8TD43 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TRPM4Q8TD43 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC22.02■■□□□ 1.12
TRPM4Q8TD43 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRPM4Q8TD43 AL139424.1-201ENST00000607572 797 ntBASIC22.02■■□□□ 1.12
TRPM4Q8TD43 AP001269.4-201ENST00000609611 512 ntBASIC22.02■■□□□ 1.12
TRPM4Q8TD43 AC104109.2-201ENST00000602919 1418 ntBASIC22.02■■□□□ 1.12
TRPM4Q8TD43 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.02■■□□□ 1.12
TRPM4Q8TD43 AL137060.1-201ENST00000618151 2648 ntBASIC22.02■■□□□ 1.12
TRPM4Q8TD43 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TRPM4Q8TD43 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
TRPM4Q8TD43 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC22.02■■□□□ 1.11
TRPM4Q8TD43 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TRPM4Q8TD43 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRPM4Q8TD43 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
TRPM4Q8TD43 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
TRPM4Q8TD43 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
TRPM4Q8TD43 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC22.01■■□□□ 1.11
TRPM4Q8TD43 AL355385.1-201ENST00000606123 409 ntBASIC22.01■■□□□ 1.11
TRPM4Q8TD43 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRPM4Q8TD43 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.01■■□□□ 1.11
TRPM4Q8TD43 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRPM4Q8TD43 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRPM4Q8TD43 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRPM4Q8TD43 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRPM4Q8TD43 PAN3-AS1-201ENST00000563843 1351 ntBASIC22■■□□□ 1.11
TRPM4Q8TD43 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRPM4Q8TD43 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC22■■□□□ 1.11
TRPM4Q8TD43 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRPM4Q8TD43 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22■■□□□ 1.11
TRPM4Q8TD43 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC22■■□□□ 1.11
TRPM4Q8TD43 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
TRPM4Q8TD43 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC22■■□□□ 1.11
TRPM4Q8TD43 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC22■■□□□ 1.11
TRPM4Q8TD43 CCS-201ENST00000310190 942 ntTSL 5 BASIC22■■□□□ 1.11
TRPM4Q8TD43 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC22■■□□□ 1.11
TRPM4Q8TD43 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRPM4Q8TD43 IGHV3-22-201ENST00000520721 359 ntBASIC22■■□□□ 1.11
TRPM4Q8TD43 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC22■■□□□ 1.11
TRPM4Q8TD43 AC145285.3-201ENST00000564603 959 ntBASIC22■■□□□ 1.11
TRPM4Q8TD43 AC140113.2-201ENST00000604370 208 ntBASIC22■■□□□ 1.11
TRPM4Q8TD43 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRPM4Q8TD43 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRPM4Q8TD43 AL357033.4-201ENST00000617703 1807 ntBASIC22■■□□□ 1.11
TRPM4Q8TD43 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRPM4Q8TD43 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRPM4Q8TD43 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC22■■□□□ 1.11
TRPM4Q8TD43 FEM1AP3-201ENST00000403722 1741 ntBASIC22■■□□□ 1.11
TRPM4Q8TD43 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRPM4Q8TD43 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRPM4Q8TD43 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TRPM4Q8TD43 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
TRPM4Q8TD43 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRPM4Q8TD43 KRT8P50-201ENST00000562022 1438 ntBASIC21.99■■□□□ 1.11
TRPM4Q8TD43 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.99■■□□□ 1.11
TRPM4Q8TD43 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRPM4Q8TD43 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
TRPM4Q8TD43 TP73-AS1-210ENST00000637775 1455 ntBASIC21.99■■□□□ 1.11
TRPM4Q8TD43 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRPM4Q8TD43 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC21.99■■□□□ 1.11
TRPM4Q8TD43 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC21.99■■□□□ 1.11
TRPM4Q8TD43 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TRPM4Q8TD43 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.99■■□□□ 1.11
TRPM4Q8TD43 AL356488.2-201ENST00000602755 427 ntBASIC21.99■■□□□ 1.11
TRPM4Q8TD43 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TRPM4Q8TD43 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.99■■□□□ 1.11
TRPM4Q8TD43 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRPM4Q8TD43 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRPM4Q8TD43 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRPM4Q8TD43 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.99■■□□□ 1.11
TRPM4Q8TD43 IRX1P1-201ENST00000438849 1838 ntBASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms