Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AIRN-201ENST00000601203 4374 ntBASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 HEIH-201ENST00000623091 1652 ntBASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 MIR4674-201ENST00000582457 87 ntBASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 AC068587.9-201ENST00000641814 219 ntBASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 MTMR9LP-203ENST00000426597 1545 ntBASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SIMC1Q8NDZ2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 GPAT2P1-201ENST00000444924 1672 ntBASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 FZD10-202ENST00000539839 3282 ntBASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 ECEL1P3-201ENST00000427961 737 ntBASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 BX088651.1-201ENST00000540551 451 ntBASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 AL023803.3-201ENST00000615559 522 ntBASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 AC010947.1-201ENST00000623454 693 ntBASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 RCC2P3-201ENST00000418112 1537 ntBASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIMC1Q8NDZ2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIMC1Q8NDZ2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIMC1Q8NDZ2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIMC1Q8NDZ2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SIMC1Q8NDZ2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIMC1Q8NDZ2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIMC1Q8NDZ2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SIMC1Q8NDZ2 MMP23A-201ENST00000234610 1017 ntBASIC17.54■□□□□ 0.4
SIMC1Q8NDZ2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.54■□□□□ 0.4
SIMC1Q8NDZ2 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.54■□□□□ 0.4
SIMC1Q8NDZ2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SIMC1Q8NDZ2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIMC1Q8NDZ2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.54■□□□□ 0.4
SIMC1Q8NDZ2 PCDHB18P-201ENST00000524813 2368 ntBASIC17.54■□□□□ 0.4
SIMC1Q8NDZ2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIMC1Q8NDZ2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIMC1Q8NDZ2 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.54■□□□□ 0.4
SIMC1Q8NDZ2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIMC1Q8NDZ2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
SIMC1Q8NDZ2 AC008556.1-201ENST00000610908 2040 ntBASIC17.54■□□□□ 0.4
SIMC1Q8NDZ2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 AC093525.10-201ENST00000625130 1569 ntBASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
SIMC1Q8NDZ2 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms