Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.81■□□□□ 0.44
ZNF248Q8NDW4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF248Q8NDW4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF248Q8NDW4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF248Q8NDW4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF248Q8NDW4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.81■□□□□ 0.44
ZNF248Q8NDW4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF248Q8NDW4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF248Q8NDW4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF248Q8NDW4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.81■□□□□ 0.44
ZNF248Q8NDW4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.81■□□□□ 0.44
ZNF248Q8NDW4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF248Q8NDW4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.81■□□□□ 0.44
ZNF248Q8NDW4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.81■□□□□ 0.44
ZNF248Q8NDW4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF248Q8NDW4 AC009237.14-201ENST00000609975 1594 ntBASIC17.81■□□□□ 0.44
ZNF248Q8NDW4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF248Q8NDW4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
ZNF248Q8NDW4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
ZNF248Q8NDW4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF248Q8NDW4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF248Q8NDW4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 KRT18P31-201ENST00000506277 1292 ntBASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 FOSL1P1-201ENST00000511041 816 ntBASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 AP002469.2-201ENST00000531724 424 ntBASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 TPSP2-201ENST00000561760 610 ntBASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF248Q8NDW4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.79■□□□□ 0.44
ZNF248Q8NDW4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF248Q8NDW4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF248Q8NDW4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ZNF248Q8NDW4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF248Q8NDW4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF248Q8NDW4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ZNF248Q8NDW4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF248Q8NDW4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.79■□□□□ 0.44
ZNF248Q8NDW4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
ZNF248Q8NDW4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ZNF248Q8NDW4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.79■□□□□ 0.44
ZNF248Q8NDW4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
ZNF248Q8NDW4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
ZNF248Q8NDW4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ZNF248Q8NDW4 AC117500.6-201ENST00000624871 588 ntBASIC17.79■□□□□ 0.44
ZNF248Q8NDW4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.79■□□□□ 0.44
ZNF248Q8NDW4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.79■□□□□ 0.44
ZNF248Q8NDW4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF248Q8NDW4 AC120498.9-201ENST00000339021 3867 ntBASIC17.79■□□□□ 0.44
ZNF248Q8NDW4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.79■□□□□ 0.44
ZNF248Q8NDW4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF248Q8NDW4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF248Q8NDW4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
ZNF248Q8NDW4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF248Q8NDW4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF248Q8NDW4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
ZNF248Q8NDW4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ZNF248Q8NDW4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF248Q8NDW4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF248Q8NDW4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF248Q8NDW4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ZNF248Q8NDW4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF248Q8NDW4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF248Q8NDW4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ZNF248Q8NDW4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF248Q8NDW4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.78■□□□□ 0.44
ZNF248Q8NDW4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF248Q8NDW4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF248Q8NDW4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.78■□□□□ 0.44
ZNF248Q8NDW4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF248Q8NDW4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ZNF248Q8NDW4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF248Q8NDW4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF248Q8NDW4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF248Q8NDW4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
ZNF248Q8NDW4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms