Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RETREG2Q8NC44 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RETREG2Q8NC44 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RETREG2Q8NC44 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RETREG2Q8NC44 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
RETREG2Q8NC44 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.11■□□□□ 0.97
RETREG2Q8NC44 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.11■□□□□ 0.97
RETREG2Q8NC44 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.11■□□□□ 0.97
RETREG2Q8NC44 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.11■□□□□ 0.97
RETREG2Q8NC44 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
RETREG2Q8NC44 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RETREG2Q8NC44 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.1■□□□□ 0.97
RETREG2Q8NC44 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RETREG2Q8NC44 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RETREG2Q8NC44 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RETREG2Q8NC44 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RETREG2Q8NC44 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.1■□□□□ 0.97
RETREG2Q8NC44 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RETREG2Q8NC44 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.1■□□□□ 0.97
RETREG2Q8NC44 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RETREG2Q8NC44 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.1■□□□□ 0.97
RETREG2Q8NC44 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.1■□□□□ 0.97
RETREG2Q8NC44 GCSHP2-201ENST00000560971 527 ntBASIC21.1■□□□□ 0.97
RETREG2Q8NC44 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.1■□□□□ 0.97
RETREG2Q8NC44 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
RETREG2Q8NC44 AL691432.3-201ENST00000621860 400 ntBASIC21.1■□□□□ 0.97
RETREG2Q8NC44 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.1■□□□□ 0.97
RETREG2Q8NC44 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RETREG2Q8NC44 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.1■□□□□ 0.97
RETREG2Q8NC44 LINC01311-201ENST00000565162 1445 ntBASIC21.1■□□□□ 0.97
RETREG2Q8NC44 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RETREG2Q8NC44 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
RETREG2Q8NC44 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RETREG2Q8NC44 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RETREG2Q8NC44 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RETREG2Q8NC44 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RETREG2Q8NC44 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RETREG2Q8NC44 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RETREG2Q8NC44 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RETREG2Q8NC44 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
RETREG2Q8NC44 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RETREG2Q8NC44 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RETREG2Q8NC44 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RETREG2Q8NC44 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RETREG2Q8NC44 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.09■□□□□ 0.97
RETREG2Q8NC44 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RETREG2Q8NC44 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RETREG2Q8NC44 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RETREG2Q8NC44 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RETREG2Q8NC44 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.09■□□□□ 0.97
RETREG2Q8NC44 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.09■□□□□ 0.97
RETREG2Q8NC44 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RETREG2Q8NC44 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.09■□□□□ 0.97
RETREG2Q8NC44 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.09■□□□□ 0.97
RETREG2Q8NC44 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RETREG2Q8NC44 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.09■□□□□ 0.97
RETREG2Q8NC44 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.09■□□□□ 0.97
RETREG2Q8NC44 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RETREG2Q8NC44 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RETREG2Q8NC44 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RETREG2Q8NC44 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RETREG2Q8NC44 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.08■□□□□ 0.97
RETREG2Q8NC44 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RETREG2Q8NC44 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RETREG2Q8NC44 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RETREG2Q8NC44 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RETREG2Q8NC44 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RETREG2Q8NC44 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RETREG2Q8NC44 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RETREG2Q8NC44 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RETREG2Q8NC44 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
RETREG2Q8NC44 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RETREG2Q8NC44 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.08■□□□□ 0.97
RETREG2Q8NC44 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
RETREG2Q8NC44 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RETREG2Q8NC44 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.08■□□□□ 0.96
RETREG2Q8NC44 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RETREG2Q8NC44 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.08■□□□□ 0.96
RETREG2Q8NC44 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.07■□□□□ 0.96
RETREG2Q8NC44 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.07■□□□□ 0.96
RETREG2Q8NC44 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RETREG2Q8NC44 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RETREG2Q8NC44 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RETREG2Q8NC44 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.07■□□□□ 0.96
RETREG2Q8NC44 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RETREG2Q8NC44 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RETREG2Q8NC44 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
RETREG2Q8NC44 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RETREG2Q8NC44 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RETREG2Q8NC44 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.07■□□□□ 0.96
RETREG2Q8NC44 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
RETREG2Q8NC44 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.07■□□□□ 0.96
RETREG2Q8NC44 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.07■□□□□ 0.96
RETREG2Q8NC44 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RETREG2Q8NC44 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.07■□□□□ 0.96
RETREG2Q8NC44 AC083849.1-201ENST00000615227 514 ntBASIC21.07■□□□□ 0.96
RETREG2Q8NC44 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.07■□□□□ 0.96
RETREG2Q8NC44 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RETREG2Q8NC44 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RETREG2Q8NC44 AC006333.2-201ENST00000607957 2099 ntBASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms