Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC38A9Q8NBW4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC38A9Q8NBW4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC38A9Q8NBW4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC38A9Q8NBW4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC38A9Q8NBW4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SLC38A9Q8NBW4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC38A9Q8NBW4 AC005332.7-201ENST00000614046 2005 ntBASIC17.57■□□□□ 0.4
SLC38A9Q8NBW4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC38A9Q8NBW4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC38A9Q8NBW4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC38A9Q8NBW4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 HEIH-201ENST00000623091 1652 ntBASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 RNF126P1-202ENST00000569893 925 ntBASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A9Q8NBW4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 AP002383.4-201ENST00000442518 975 ntBASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 TSSC2-201ENST00000450217 709 ntBASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 BX276092.5-203ENST00000456199 560 ntBASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 AL121894.2-201ENST00000602977 491 ntBASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 AC012313.10-201ENST00000623509 926 ntBASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 Z98044.1-201ENST00000632503 1764 ntBASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 AC116562.4-201ENST00000641316 2276 ntBASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A9Q8NBW4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC38A9Q8NBW4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC38A9Q8NBW4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.54■□□□□ 0.4
SLC38A9Q8NBW4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.54■□□□□ 0.4
SLC38A9Q8NBW4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC38A9Q8NBW4 MTMR9LP-203ENST00000426597 1545 ntBASIC17.54■□□□□ 0.4
SLC38A9Q8NBW4 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.54■□□□□ 0.4
SLC38A9Q8NBW4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC38A9Q8NBW4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC38A9Q8NBW4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC38A9Q8NBW4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC38A9Q8NBW4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.54■□□□□ 0.4
SLC38A9Q8NBW4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.54■□□□□ 0.4
SLC38A9Q8NBW4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
SLC38A9Q8NBW4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.54■□□□□ 0.4
SLC38A9Q8NBW4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.54■□□□□ 0.4
SLC38A9Q8NBW4 MIR3180-1-201ENST00000580374 94 ntBASIC17.54■□□□□ 0.4
SLC38A9Q8NBW4 MIR3180-3-201ENST00000584616 94 ntBASIC17.54■□□□□ 0.4
SLC38A9Q8NBW4 AL121672.3-201ENST00000608644 468 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms