Protein–RNA interactions for Protein: Q8NBK3

SUMF1, Sulfatase-modifying factor 1, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMF1Q8NBK3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUMF1Q8NBK3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SUMF1Q8NBK3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUMF1Q8NBK3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.29■□□□□ 0.52
SUMF1Q8NBK3 RCN1P2-201ENST00000398357 915 ntBASIC18.29■□□□□ 0.52
SUMF1Q8NBK3 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.29■□□□□ 0.52
SUMF1Q8NBK3 AC004832.2-201ENST00000426397 482 ntBASIC18.29■□□□□ 0.52
SUMF1Q8NBK3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SUMF1Q8NBK3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUMF1Q8NBK3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.29■□□□□ 0.52
SUMF1Q8NBK3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.29■□□□□ 0.52
SUMF1Q8NBK3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SUMF1Q8NBK3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.29■□□□□ 0.52
SUMF1Q8NBK3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SUMF1Q8NBK3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUMF1Q8NBK3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUMF1Q8NBK3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.29■□□□□ 0.52
SUMF1Q8NBK3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUMF1Q8NBK3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SUMF1Q8NBK3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUMF1Q8NBK3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.28■□□□□ 0.52
SUMF1Q8NBK3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.28■□□□□ 0.52
SUMF1Q8NBK3 KRT18P28-201ENST00000453838 1332 ntBASIC18.28■□□□□ 0.52
SUMF1Q8NBK3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUMF1Q8NBK3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUMF1Q8NBK3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.28■□□□□ 0.52
SUMF1Q8NBK3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.28■□□□□ 0.52
SUMF1Q8NBK3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUMF1Q8NBK3 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SUMF1Q8NBK3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.28■□□□□ 0.52
SUMF1Q8NBK3 AP001269.4-201ENST00000609611 512 ntBASIC18.28■□□□□ 0.52
SUMF1Q8NBK3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SUMF1Q8NBK3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUMF1Q8NBK3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
SUMF1Q8NBK3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUMF1Q8NBK3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUMF1Q8NBK3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
SUMF1Q8NBK3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SUMF1Q8NBK3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SUMF1Q8NBK3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.27■□□□□ 0.52
SUMF1Q8NBK3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SUMF1Q8NBK3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SUMF1Q8NBK3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SUMF1Q8NBK3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SUMF1Q8NBK3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.27■□□□□ 0.52
SUMF1Q8NBK3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SUMF1Q8NBK3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.27■□□□□ 0.52
SUMF1Q8NBK3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.27■□□□□ 0.52
SUMF1Q8NBK3 CYMP-203ENST00000474680 1263 ntBASIC18.27■□□□□ 0.52
SUMF1Q8NBK3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.27■□□□□ 0.52
SUMF1Q8NBK3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.27■□□□□ 0.52
SUMF1Q8NBK3 AC021087.4-201ENST00000563761 564 ntBASIC18.27■□□□□ 0.52
SUMF1Q8NBK3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.27■□□□□ 0.52
SUMF1Q8NBK3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.27■□□□□ 0.52
SUMF1Q8NBK3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.27■□□□□ 0.52
SUMF1Q8NBK3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.27■□□□□ 0.52
SUMF1Q8NBK3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SUMF1Q8NBK3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SUMF1Q8NBK3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SUMF1Q8NBK3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SUMF1Q8NBK3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SUMF1Q8NBK3 RCC2P3-201ENST00000418112 1537 ntBASIC18.27■□□□□ 0.51
SUMF1Q8NBK3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SUMF1Q8NBK3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SUMF1Q8NBK3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SUMF1Q8NBK3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
SUMF1Q8NBK3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SUMF1Q8NBK3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SUMF1Q8NBK3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUMF1Q8NBK3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.26■□□□□ 0.51
SUMF1Q8NBK3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUMF1Q8NBK3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUMF1Q8NBK3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SUMF1Q8NBK3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SUMF1Q8NBK3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUMF1Q8NBK3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUMF1Q8NBK3 AC092910.1-201ENST00000482027 1129 ntBASIC18.26■□□□□ 0.51
SUMF1Q8NBK3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.26■□□□□ 0.51
SUMF1Q8NBK3 RNA5SP415-201ENST00000517246 115 ntBASIC18.26■□□□□ 0.51
SUMF1Q8NBK3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.26■□□□□ 0.51
SUMF1Q8NBK3 RFPL4AP1-201ENST00000530883 850 ntBASIC18.26■□□□□ 0.51
SUMF1Q8NBK3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.26■□□□□ 0.51
SUMF1Q8NBK3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.26■□□□□ 0.51
SUMF1Q8NBK3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.26■□□□□ 0.51
SUMF1Q8NBK3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SUMF1Q8NBK3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SUMF1Q8NBK3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SUMF1Q8NBK3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUMF1Q8NBK3 HLA-J-201ENST00000462773 1622 ntBASIC18.26■□□□□ 0.51
SUMF1Q8NBK3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUMF1Q8NBK3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.25■□□□□ 0.51
SUMF1Q8NBK3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SUMF1Q8NBK3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.25■□□□□ 0.51
SUMF1Q8NBK3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.25■□□□□ 0.51
SUMF1Q8NBK3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUMF1Q8NBK3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.25■□□□□ 0.51
SUMF1Q8NBK3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUMF1Q8NBK3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SUMF1Q8NBK3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUMF1Q8NBK3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms