Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC33Q8N5R6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC33Q8N5R6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 TSPY21P-201ENST00000433481 731 ntBASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC33Q8N5R6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 AC140113.3-201ENST00000605663 199 ntBASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 AL023973.1-201ENST00000624619 620 ntBASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC33Q8N5R6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC33Q8N5R6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC33Q8N5R6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC33Q8N5R6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC33Q8N5R6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC33Q8N5R6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC33Q8N5R6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC33Q8N5R6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CCDC33Q8N5R6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC33Q8N5R6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC33Q8N5R6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC33Q8N5R6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC33Q8N5R6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC33Q8N5R6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.53■□□□□ 0.72
CCDC33Q8N5R6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.53■□□□□ 0.72
CCDC33Q8N5R6 AP003041.3-201ENST00000527151 707 ntBASIC19.53■□□□□ 0.72
CCDC33Q8N5R6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCDC33Q8N5R6 CKBP1-201ENST00000565489 1086 ntBASIC19.53■□□□□ 0.72
CCDC33Q8N5R6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC33Q8N5R6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CCDC33Q8N5R6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.53■□□□□ 0.72
CCDC33Q8N5R6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC33Q8N5R6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC33Q8N5R6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC33Q8N5R6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC33Q8N5R6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC33Q8N5R6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC33Q8N5R6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC33Q8N5R6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC33Q8N5R6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC33Q8N5R6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC33Q8N5R6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC33Q8N5R6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC33Q8N5R6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC33Q8N5R6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
CCDC33Q8N5R6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC33Q8N5R6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC33Q8N5R6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC33Q8N5R6 AC104581.1-202ENST00000635932 2618 ntBASIC19.52■□□□□ 0.72
CCDC33Q8N5R6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC33Q8N5R6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms