Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB42Q8N4Z0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 INGX-201ENST00000359239 846 ntBASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 AC113347.1-201ENST00000413321 391 ntBASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 WWOX-216ENST00000569818 525 ntBASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 AP000974.1-201ENST00000623909 2387 ntBASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB42Q8N4Z0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 AC008556.1-201ENST00000610908 2040 ntBASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 MIR4674-201ENST00000582457 87 ntBASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 AC036111.1-201ENST00000533973 1582 ntBASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB42Q8N4Z0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RAB42Q8N4Z0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
RAB42Q8N4Z0 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RAB42Q8N4Z0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RAB42Q8N4Z0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB42Q8N4Z0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RAB42Q8N4Z0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAB42Q8N4Z0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RAB42Q8N4Z0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RAB42Q8N4Z0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.14■□□□□ 0.49
RAB42Q8N4Z0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.14■□□□□ 0.49
RAB42Q8N4Z0 AC034236.2-201ENST00000606662 1610 ntBASIC18.14■□□□□ 0.49
RAB42Q8N4Z0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB42Q8N4Z0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.14■□□□□ 0.49
RAB42Q8N4Z0 ECEL1P3-201ENST00000427961 737 ntBASIC18.14■□□□□ 0.49
RAB42Q8N4Z0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.14■□□□□ 0.49
RAB42Q8N4Z0 CR769767.2-201ENST00000622735 460 ntBASIC18.14■□□□□ 0.49
RAB42Q8N4Z0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB42Q8N4Z0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB42Q8N4Z0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.14■□□□□ 0.49
RAB42Q8N4Z0 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB42Q8N4Z0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RAB42Q8N4Z0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB42Q8N4Z0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB42Q8N4Z0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RAB42Q8N4Z0 KRT8P7-201ENST00000533003 1432 ntBASIC18.14■□□□□ 0.49
RAB42Q8N4Z0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB42Q8N4Z0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.13■□□□□ 0.49
RAB42Q8N4Z0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB42Q8N4Z0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms