Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
DHX40Q8IX18 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.74■□□□□ 0.91
DHX40Q8IX18 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
DHX40Q8IX18 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
DHX40Q8IX18 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DHX40Q8IX18 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DHX40Q8IX18 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.74■□□□□ 0.91
DHX40Q8IX18 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DHX40Q8IX18 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DHX40Q8IX18 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.73■□□□□ 0.91
DHX40Q8IX18 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
DHX40Q8IX18 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
DHX40Q8IX18 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DHX40Q8IX18 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.73■□□□□ 0.91
DHX40Q8IX18 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
DHX40Q8IX18 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.73■□□□□ 0.91
DHX40Q8IX18 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DHX40Q8IX18 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DHX40Q8IX18 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
DHX40Q8IX18 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.73■□□□□ 0.91
DHX40Q8IX18 SLC25A6P5-201ENST00000435663 894 ntBASIC20.73■□□□□ 0.91
DHX40Q8IX18 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DHX40Q8IX18 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.73■□□□□ 0.91
DHX40Q8IX18 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DHX40Q8IX18 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
DHX40Q8IX18 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
DHX40Q8IX18 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
DHX40Q8IX18 AC008403.3-201ENST00000598924 454 ntBASIC20.73■□□□□ 0.91
DHX40Q8IX18 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.73■□□□□ 0.91
DHX40Q8IX18 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DHX40Q8IX18 AC004264.1-201ENST00000608354 794 ntBASIC20.73■□□□□ 0.91
DHX40Q8IX18 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.73■□□□□ 0.91
DHX40Q8IX18 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.73■□□□□ 0.91
DHX40Q8IX18 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DHX40Q8IX18 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.73■□□□□ 0.91
DHX40Q8IX18 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DHX40Q8IX18 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.73■□□□□ 0.91
DHX40Q8IX18 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DHX40Q8IX18 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
DHX40Q8IX18 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DHX40Q8IX18 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.72■□□□□ 0.91
DHX40Q8IX18 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DHX40Q8IX18 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.72■□□□□ 0.91
DHX40Q8IX18 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.72■□□□□ 0.91
DHX40Q8IX18 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
DHX40Q8IX18 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DHX40Q8IX18 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DHX40Q8IX18 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DHX40Q8IX18 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.72■□□□□ 0.91
DHX40Q8IX18 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
DHX40Q8IX18 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.72■□□□□ 0.91
DHX40Q8IX18 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DHX40Q8IX18 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.72■□□□□ 0.91
DHX40Q8IX18 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.72■□□□□ 0.91
DHX40Q8IX18 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DHX40Q8IX18 AC026366.1-201ENST00000488803 879 ntBASIC20.72■□□□□ 0.91
DHX40Q8IX18 AP003097.1-201ENST00000530657 1135 ntBASIC20.72■□□□□ 0.91
DHX40Q8IX18 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DHX40Q8IX18 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DHX40Q8IX18 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DHX40Q8IX18 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DHX40Q8IX18 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DHX40Q8IX18 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.71■□□□□ 0.91
DHX40Q8IX18 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
DHX40Q8IX18 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DHX40Q8IX18 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DHX40Q8IX18 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DHX40Q8IX18 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DHX40Q8IX18 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
DHX40Q8IX18 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DHX40Q8IX18 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DHX40Q8IX18 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.71■□□□□ 0.91
DHX40Q8IX18 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
DHX40Q8IX18 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DHX40Q8IX18 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.71■□□□□ 0.91
DHX40Q8IX18 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
DHX40Q8IX18 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.71■□□□□ 0.91
DHX40Q8IX18 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DHX40Q8IX18 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DHX40Q8IX18 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
DHX40Q8IX18 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DHX40Q8IX18 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DHX40Q8IX18 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DHX40Q8IX18 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
DHX40Q8IX18 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DHX40Q8IX18 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
DHX40Q8IX18 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DHX40Q8IX18 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.7■□□□□ 0.9
DHX40Q8IX18 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DHX40Q8IX18 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.7■□□□□ 0.9
DHX40Q8IX18 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
DHX40Q8IX18 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DHX40Q8IX18 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DHX40Q8IX18 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DHX40Q8IX18 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.7■□□□□ 0.9
DHX40Q8IX18 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DHX40Q8IX18 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.7■□□□□ 0.9
DHX40Q8IX18 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.7■□□□□ 0.9
DHX40Q8IX18 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DHX40Q8IX18 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms